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berkeley_reactor_200306_planktonic_scaffold_161060_55

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 68484..69383

Top 3 Functional Annotations

Value Algorithm Source
Cation diffusion facilitator family transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCG9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 278.0
  • Bit_score: 344
  • Evalue 6.30e-92
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEF62637.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 278.0
  • Bit_score: 344
  • Evalue 8.80e-92
Co/Zn/Cd cation transporter similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 298.0
  • Bit_score: 312
  • Evalue 1.30e-82

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 900
GTGTCGTCCAAGCGATTGAAACGCAGTTTGCGCGCGACGTTCATTGGTCTTGCCGTGAACGTGGCGTTGACTGTTGCCAAATTTCTGGCCGGCATTCTCGGTCATTCCCAGGCGCTCATTGCGGACGCGGTGGAATCACTGGCGGATATTTTCAGTTCCATCATCGTGTGGCGCGGGCTGGTGGTGGCGGAAACGCCGCCGGATGAAGATCATCCTTACGGCCACGGCAAGGCCGAGCCGCTGGCGGCGGCGATCGTTTCCGCCATGCTGCTGCTGGCGGCCGGCCTGATTGCCTGGCACTCTTATCACGGCATCATCGAGCCGCGCCTGCCGCCGTCGCCGTGGACTTTGATTGTCCTGGTCGGAGTCATTGTCTTGAAGGAAACCTTGTTCCGTTACGTTCTGAGCGAATCGTCGCATGTGGGCAGTTCCGCCATGGAGACGGATGCCTGGCATCATCGCAGCGACGCCATCACTTCGGCGGCGGCGTTCATCGGCATCGGCATCGCGCTGGTCGGCGGCAAAGGCTATGAAAACGCGGACAACTGGGCGGCCATGGCGGCGGCGGTTGTCATCGCCTTCAATGGCTGGCGGTTGTTGCGGCCGGCCTTCAATGAATTGATGGACCGCGCGCCCGACCGCGAACTCATTGACCAGATCCGCGCCATTGCCAAAACCATTCCCGGCGCGGACGACATTGACAAGTGCCACGTCCGAAAGATGGGGTATCAGTATTTCGTGGACATCCACGTGGAGGTGGACCCGCAGATGACCGTGGAGTGCTCCCACAAAATCGCGCACGATGTGAAGGACAAATTGCGCGGGGAAATGCCCACGGTGCGCGACGTGCTGGTTCACATTGAACCCCTCAAAACCAAGCTGCGGAAAGCCCGCGAATGA
PROTEIN sequence
Length: 300
VSSKRLKRSLRATFIGLAVNVALTVAKFLAGILGHSQALIADAVESLADIFSSIIVWRGLVVAETPPDEDHPYGHGKAEPLAAAIVSAMLLLAAGLIAWHSYHGIIEPRLPPSPWTLIVLVGVIVLKETLFRYVLSESSHVGSSAMETDAWHHRSDAITSAAAFIGIGIALVGGKGYENADNWAAMAAAVVIAFNGWRLLRPAFNELMDRAPDRELIDQIRAIAKTIPGADDIDKCHVRKMGYQYFVDIHVEVDPQMTVECSHKIAHDVKDKLRGEMPTVRDVLVHIEPLKTKLRKARE*