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berkeley_reactor_200306_planktonic_scaffold_161060_39

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 51011..51847

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ50_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 266.0
  • Bit_score: 307
  • Evalue 7.90e-81
Pseudouridine synthase {ECO:0000313|EMBL:EEF58054.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 266.0
  • Bit_score: 307
  • Evalue 1.10e-80
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 272.0
  • Bit_score: 162
  • Evalue 8.90e-38

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 837
GTGAGCAAGCCCGTCAAATTGTCGTCGCCCGCCACCGGCGGGTTTTGGGAAATAGCCGTTCTCTTTGAAGACGAACACCTGCTGGCGCTCGACAAACCCGCCGGCATTCCGACCCATCCGGAAAGCGAGGAAGATTTGCGGCCCAATCTCATGCGGCTGCTGCACGACGGCATTGCCGCCGGCAAGCCCTGGGCGCAGGCACGCCAGCTGGCCTATTTGAACAACGCACACCGGCTTGGTGCCTCCACCAGCGGCGTTTTGCTCCTGGCCAAAAACAAGGCGGCGCACGAAGCGGTGGCCAATTGGTTCGGCTCGGAAAAACCGTTCCGAAAGCATCTGGCCATCGTTTGGGGCAATCCTCCGGCGGCGCATTTTGAAGTGGATGCCAAACTCTCGCCGCATCCCCTTAAAGCCGGCCAGATGTGCGTGGACCGCCGCAGCGGGAAAAAATCCCTGACGACGTTTGAAGTGCTGGAGCAGTTCTCCGACTGGGCGCTCGTGCGCTGCCTGCCGCTGACCGAGCGCAAACACCAGGTGCGGCTTCACCTGAAACACGCCGGATTCCCGGTCGTGGGCGACAGCGTTTATGGCGGAAAGAATCTCTGGTTGTCCCGGTTGAAGCGCGGTTACCGCTTGAAGGAAGGGCGCGATGAACGGCCGCTGATTTCACGACCCGCCCAGCATTTGGAGGAATTGTCCGTGCCTCATCCGGTCACCGGCGAAGTGGTGGTCATCAAGAGCGAATGGCCCAAAGACATGCGCGTGGCGGTGAAATATCTCCGGCAATACGCGACCGGTTCCAGCCGGCGCGGCCTGGCGGACGCCGATCAGGCATAA
PROTEIN sequence
Length: 279
VSKPVKLSSPATGGFWEIAVLFEDEHLLALDKPAGIPTHPESEEDLRPNLMRLLHDGIAAGKPWAQARQLAYLNNAHRLGASTSGVLLLAKNKAAHEAVANWFGSEKPFRKHLAIVWGNPPAAHFEVDAKLSPHPLKAGQMCVDRRSGKKSLTTFEVLEQFSDWALVRCLPLTERKHQVRLHLKHAGFPVVGDSVYGGKNLWLSRLKRGYRLKEGRDERPLISRPAQHLEELSVPHPVTGEVVVIKSEWPKDMRVAVKYLRQYATGSSRRGLADADQA*