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berkeley_reactor_200306_planktonic_scaffold_161060_89

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(111100..111519)

Top 3 Functional Annotations

Value Algorithm Source
peptide chain release factor id=24421214 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 161
  • Evalue 3.50e-37
peptide chain release factor similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 128.0
  • Bit_score: 147
  • Evalue 2.50e-33
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 132.0
  • Bit_score: 165
  • Evalue 4.40e-38

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Taxonomy

RLO_RIF02_62_27 → RIF2 → Bacteria

Sequences

DNA sequence
Length: 420
ATGAGTCAATTCCCCGTCAGTTTGGAAAAGGAAAGCCAGCTTGCGCGGCGCATGACGGCGCTGGGCGTGAGCGAGGCGGACATCGAAGAAACCTTTGTGCGTTCCGGCGGCCATGGCGGGCAGAACGTGAACAAGACGGCGACGTGCGTGATGCTCTGGCACAAGCCGACGCAGTTGCGCGTGAAATGCCAGACGACCCGCCAGCAGGGCATGAACCGCTTCCTCGCCCGGCGCCTGTTGCTCGACAAAATCGAAGCGATGCAAAAAGGATACGTGGCCGCGAAGCGCGACGAGGCCGAACGCATTCGCCGGCAAAAGCGCCGCCGCAGCCGCCGCGCCAAGCAACGCATGCTGGCGGACAAGGCGCATCAAGCCGAGAAGAAAGCGGGGCGACGGCGCAGGGACCGGTCGTCGGAGTGA
PROTEIN sequence
Length: 140
MSQFPVSLEKESQLARRMTALGVSEADIEETFVRSGGHGGQNVNKTATCVMLWHKPTQLRVKCQTTRQQGMNRFLARRLLLDKIEAMQKGYVAAKRDEAERIRRQKRRRSRRAKQRMLADKAHQAEKKAGRRRRDRSSE*