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berkeley_reactor_200306_planktonic_scaffold_158606_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(69448..70905)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 465.0
  • Bit_score: 404
  • Evalue 1.50e-109
Heavy metal sensor signal transduction histidine kinase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3ITU1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 465.0
  • Bit_score: 404
  • Evalue 1.10e-109
sensor histidine kinase, HAMP domain-containing similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 465.0
  • Bit_score: 394
  • Evalue 4.10e-107

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Taxonomy

Methylobacter tundripaludum → Methylobacter → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGTCCTCGAAGAACACTGATACGCTATCGTCCCGGCGCGCGGGACTTTTTTCCGCCGTTCGCGGTTCCATCGTCGGGCGGCTGACCGTGCTCTACACGCTTTCAGCCTTCGGCATGTTGGTGCTGGCGGCGGGATTCTTGCACTGGACGCTGGCGGTGAATTTTCACCGCGAAGATGCCCAATTCCTCGCCGATAAAGTTGGATTGCTTCGCACTATTCTGGGTCAAAATCCTACTGGCACCGACGCGCTCAAGGAAGAAGTGGAATGGGAAACCGCCGCGCTGCACTTCGCCAAATACTACGCCCGCGTGCTCGATGGGCGCGGCCACACGCTGATTGAGACGCCCGGCATGAGCAATGTCCTGCCCGCCGTCGTTTTTCCCGTGCCGTCGGACGCGACCCGTCTGGAATCCCAAGTGGCGAGCCGAACTTTTGCTCACGATCAAAAACTTTTGTTGCTGGGCGCGACCGGAGGAAACGGAGCGCGCCAGATTCAAGTGGCGCTGGACGTGTCGGACGAGGAGGCGTTTTTGCAACGCTATCGCCGCGACCTCGCTTGGGCCGTTTTGTTCGGCGTGTTGTTTTCGGCGGTGGCCGGCGGGCTCGTGGCGCGGCGCGGCATGAGACCGCTGGCGGAACTGACGCAGGCGACCGACCGCATCAGCGCCAGTCAGTTGCACGAACGCATTGCGGGCGAGGGCTGGCCAAAGGAACTGGCGTCGCTGGCCAAGGGCTTTGACCGGATGCTGGACAGGTTGGAAGATTCGTTCCGGCGGCTGTCGCAGTTTTCCGGCGACCTGGCGCATGAACTGCGCACGCCCATCAACAATCTGCGCGGCGAGGCCGGCGTGGCGCTTTCCCAATCCCGCACGCCGGAAGAATACCGGCGCACACTCGAATCCAGTTTGGAGGAATTTGAGCGCCTGACCCGTTTGATAGACAACCTGCTGTTTCTGGCGCGGGCGGATCATCCGGCAACCGGCATTACGCGCGTCTGCTGCGACGCCCGCCAAGCGGTGGAAGATGTGCGTGAATTTTACGAGGCGCTGGCGGAAGATCGTGGCGTGGAACTACGTTGCGAAGGACAAGGCCAGGTTCACGCCGACCCGGTGCTGTTCCGGCAGGCCGTGAGCAATCTACTGTCCAACGCACTGAACCACACGCCGCGTGGCGGCGGCGTGCATGTTCAAATCATCCCAGGTGCGGACGGCGGGTTGGAAGTGGTCGTGAGCGACACCGGCTGCGGCATTGCCGCCGAACATCTGCCCAACATTTTCGACCGCTTGTATCGTGCCGATCCGGCGCGTTCGCAACATCCTAATGGCGCGGGACTCGGTCTGGCCATTGTGAAATCCATCATGGCCTTGCACGGCGGTTCCGTGGAGGTTCAGAGCGAGGTTGGCAAAGGCACAAGGTTCACGCTCATCTTCCCCACAGTTTCAGCTTCAACAAGCTGA
PROTEIN sequence
Length: 486
MSSKNTDTLSSRRAGLFSAVRGSIVGRLTVLYTLSAFGMLVLAAGFLHWTLAVNFHREDAQFLADKVGLLRTILGQNPTGTDALKEEVEWETAALHFAKYYARVLDGRGHTLIETPGMSNVLPAVVFPVPSDATRLESQVASRTFAHDQKLLLLGATGGNGARQIQVALDVSDEEAFLQRYRRDLAWAVLFGVLFSAVAGGLVARRGMRPLAELTQATDRISASQLHERIAGEGWPKELASLAKGFDRMLDRLEDSFRRLSQFSGDLAHELRTPINNLRGEAGVALSQSRTPEEYRRTLESSLEEFERLTRLIDNLLFLARADHPATGITRVCCDARQAVEDVREFYEALAEDRGVELRCEGQGQVHADPVLFRQAVSNLLSNALNHTPRGGGVHVQIIPGADGGLEVVVSDTGCGIAAEHLPNIFDRLYRADPARSQHPNGAGLGLAIVKSIMALHGGSVEVQSEVGKGTRFTLIFPTVSASTS*