ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_158606_58

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(71695..72795)

Top 3 Functional Annotations

Value Algorithm Source
FTR1 family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4T9_ACIC5 similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 2.70e-113
FTR1 family protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 7.70e-114
FTR1 family protein {ECO:0000313|EMBL:ACO31791.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 3.80e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidobacterium capsulatum → Acidobacterium → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGAAGGACAAGCCTGCGACCCATCACGCGCATCTCGCCTTTCGCATTTTACTCCTGCTGGCGGCGCTCATTGTGGTCGGGGTATTGGTTTGGCAAGGCATCACATCGGGGGGCAATCCCGATCCCACTGTTCCAAACACCAGCCCGACCGCCGCGCTGCTCAACATTGCCGTGCTCGTGTTCCGCGAAGGCTTGGAATGTATTCTCGTGCTTTCGGCCATCACCGCCAGCATGACCGGTAACAAGCAGGCGCATCGTCGGCCTGTCATGGCGGGTGCGGGCATCGCTTTCATCGCCACAATCATCACTTGGTTCATCGCCGTCGGCATCGTGAGCAATCTGACAGGAAGTGTTTCCGCGCTCAATTTGCAAGCCGCGACCGGATTACTCGCCGTCGTCGTTCTGCTTGTGATTATGAACTGGTTCTTCCACAAGATTTATTGGGGCGGCTGGATGACGATGCACAATCGCCGCAAGAAGAATTTGATCGAAAGTGCATCCGACCCGGAAATTTCAAAGGCCAGCCTTCTGTGGGGCTTGGGCCTGCTTGGTTTCACTTCGCTCTATCGGGAAGGCTTCGAGGTCGTGCTTTTTCTCCAAAGTTATTATTTGCGAATGGGCGGAATGGCCGTCTTGCTCGGCGCATTGCTCGGACTTTTCTTAACCGGCATTGTGGCGGTGCTGACGTTTGTGGCGCATCGCAAACTGCCTTACCGGAAAATGTTGGTGTTCACTGGCATCATGCTCGGCGTGGTGCTGCTCGTCATGGTTGGCGAACAGGCGCAGGAAATGCAACTGGCGCATTGGATTCCCACGACACCAATCCACGCGCTGACGAACGTAATTCCGCCGTGGATGGGATTATGGTTCTCAATTTTCCCCACGGTGGAGACGCTGACCGCTCAAGCACTAGCGGCCATCATCGTCGTCGGCTCATACTTCCTTGCTCGCGGCAAGACGGCTCCGCCGTGTCAGGATGAGACGGAAGTTATTTTAGGCCATGCTGCGGATTGCCCAATGGCGGCAACGAACGCGGGATCGCCCAAAACAAACCAGTGTCCGCAATGCGGCATGAAGCTGGTCAAAAAGCGTAACGACTGA
PROTEIN sequence
Length: 367
MKDKPATHHAHLAFRILLLLAALIVVGVLVWQGITSGGNPDPTVPNTSPTAALLNIAVLVFREGLECILVLSAITASMTGNKQAHRRPVMAGAGIAFIATIITWFIAVGIVSNLTGSVSALNLQAATGLLAVVVLLVIMNWFFHKIYWGGWMTMHNRRKKNLIESASDPEISKASLLWGLGLLGFTSLYREGFEVVLFLQSYYLRMGGMAVLLGALLGLFLTGIVAVLTFVAHRKLPYRKMLVFTGIMLGVVLLVMVGEQAQEMQLAHWIPTTPIHALTNVIPPWMGLWFSIFPTVETLTAQALAAIIVVGSYFLARGKTAPPCQDETEVILGHAADCPMAATNAGSPKTNQCPQCGMKLVKKRND*