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berkeley_reactor_200306_planktonic_scaffold_158606_122

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(145236..146528)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHN2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 382.0
  • Bit_score: 353
  • Evalue 2.50e-94
Integrase family protein {ECO:0000313|EMBL:EEF60610.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 382.0
  • Bit_score: 353
  • Evalue 3.60e-94
integrase similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 353.0
  • Bit_score: 111
  • Evalue 3.60e-22

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1293
ATGTGCCACTGTTATGGCATGAAAGAGAATGCAGCCATAAGCAATCAGCAAAAGAGTGAAATCAAACGTCACAACCATGCGCTCACTTTCTCAAAAGTTCTGGATGGACGCAAGCAACCGATTCGTGGCTTGTGGATACGAGGCGCGCGTTATTACGCCCGGTTGAGTGTTGAAAACCCAATTACCGGCGTCAAAAAGACGCGGCGCGTGCCATTGATTGACAAGGATGGCAATGCTGTCGCGACGGTGCCGCAAGCCGTGGCGGAATTGAAACGGTTGCAAACCCAGCGGTCGGACAATGCACTGCCGACACTCGCACGGACGCCGAAGTTTGGTGATTACGCTGCACGTTATTTGGATTTTATCGGGAGTGGGCAGGGAGCTAAAAAGCCGGGCACCGTGGAAAAGGAAAAAACGATTCTTAACCGCTGGACTGAATTTTTGAGCGGACTTCGTCTCGATCAAATTAAACCCGTTCATGTCAATCGCTTCATTGAGTCTCGCATGAAAAAAAATGTGTCGTCGCGCACAATCAACCTGGACGTAATCGGGCTGCGGGTTGTTCTCAAGCGCGCCATATCTGATGGACTCATACAGCGGTTGCCGACCGAGGGGCTGCGACCCTTGAAGACCAGCACGGAAAAACGCGCCTTGTTCACGGCGGCTAATTTGGATGCGCTTTGCGCCGCCGCGTTTGAAACCAAAACGAACAAAAAGGGTGGAAACGTGCCAGTCACTGAGAATGCACAAGAGTTTGCGGATTATGTCAAACTGATGGCCTATTCCGGCGCACGTCGCAATGAAGCGCTCGGTTTGCAATGGGATGATGTTGATTTTGGAAACAACCAACTTTTTATCCGCAGACAAATTACGAGACGTGGAATCGAAGACCTGAAAAATCGTGATGCTCGGGTGGTGGATTTTAACCCCAAGTTGAAGACGCATTTGACTGAGATGAAAGCGCGTTCGCATAATGCGTCGAAATGGCTTTTCCCATCGCCGCAGCGAGGCGACAAAGACGTTCCTGCCAAAACGTTTCGTGAATCGTTGGAATTGGTTCGTGAGCGGGCAAAATTGTTGGATTTTGGTTTTCACGATTGCCGGCATCATTTTATTTCAATGTGCGTTATGAGCGGCATTGACTTTATGACGATTGCAGCATGGGTGGGTCACAAAGACGGAGGTGTTTTAATTGGAAAAGTTTATGGACACTTGGCAAATGAACATCGAAGGGCGATGGCTGAACGGCTAAAATTCGAGCCCGACGCACTTCAAAATGCAGCCAACAACTAA
PROTEIN sequence
Length: 431
MCHCYGMKENAAISNQQKSEIKRHNHALTFSKVLDGRKQPIRGLWIRGARYYARLSVENPITGVKKTRRVPLIDKDGNAVATVPQAVAELKRLQTQRSDNALPTLARTPKFGDYAARYLDFIGSGQGAKKPGTVEKEKTILNRWTEFLSGLRLDQIKPVHVNRFIESRMKKNVSSRTINLDVIGLRVVLKRAISDGLIQRLPTEGLRPLKTSTEKRALFTAANLDALCAAAFETKTNKKGGNVPVTENAQEFADYVKLMAYSGARRNEALGLQWDDVDFGNNQLFIRRQITRRGIEDLKNRDARVVDFNPKLKTHLTEMKARSHNASKWLFPSPQRGDKDVPAKTFRESLELVRERAKLLDFGFHDCRHHFISMCVMSGIDFMTIAAWVGHKDGGVLIGKVYGHLANEHRRAMAERLKFEPDALQNAANN*