ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_158606_130

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(160082..163066)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIV3_SPILD similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 740.0
  • Bit_score: 812
  • Evalue 3.50e-232
Uncharacterized protein {ECO:0000313|EMBL:KIC94339.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 740.0
  • Bit_score: 847
  • Evalue 1.80e-242
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 744.0
  • Bit_score: 826
  • Evalue 6.70e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2985
ATGAACACGGATGTCGGAGAGTTGGGACGCAAATTTTCCCAAAACTCAGGATCAACCGCAACGCGGCATTCTCTGATCGCTGAAAAGATTATGAAAATGAAAGCCCACCGTTTTGCAAGACTGGTATTGTTCGCCCTCCTGGCCGGATGGTGTTGCGGCGCACTGGCTGGGGATCGTGCCGCCAACAACCGTGACCGGTCGTTCGATTCCGGCTGGCGTTTCCTGCGCGCGGATGCGTCGGGCGCGGAAGCTCCGGCGTTAGATGATTCCCAATGGCGCGTGCTGGACATACCGCACGATTGGAGCATTGAGGATTTGCCGCCGCTCAAAAAGTCATCGGCTCCGGAATTGTCGGTGGTGCCTGGCCAGTGGCGTTTTCATAAAAGCGATGACATGGCGTGGAAAGCGCCCGCGTTTGACGATGGCCAGTGGCAGAACGTCACGTTGCCGGACAACTGGGAGCATCATTCGAACTACACGAACGACAATGTCTATGGCTGGTTTCGCCGCCGCATCGAAATTCCCGCCAGCTTGAAGGGCAAGGACTTTGACCTGTTGCTCGGCTGCATTGACGATGTGGATGAAACGTTCCTGAACGGCCAGCGCATCGGCGGCATGGGATCGTTTCCGCCGAATTTCCAAACGGCTTGGGACAAGCAGCGCTGCTATCACGTTCCCGCGTCGCTCGTGCGTGGCGATGGCTCGGATGTGATCGCGGTGCGCGTCTTCGACGGCGGCGGCAACGGCGGCATTTACGAGGCGGGTGTGAAGGCGGTTCGCGTCGGTCCATTCGATACGAGTCTCAGTGAAGGTGGCGCGTCCACCGGACACGTCGTTGGCGGCACAGGTTGGTATCGCAAGCATTTTACACTGTCGCCGGCGGACGATGGCAAGCTCATGGCCGTGCGTTTCGACGGCGTTTACATGAATGCCGATACCTGGATCAACGGCCATCTGCTGGGCAATCATCCTCACGGTTACACGAGTTTTGAATACGATCTCACACCTTATCTCAAACCGGCCGGCCAGGAAAACATCATCGCCGTCCGCGTCCGCAATGACGGCAAAAACAGCCGCTGGTATTCCGGCTCGGGAATCTATCGCCACGTCTGGCTGACCGTGAGAAATCCAATCCACATTCCCACTTGGGGCGTGTTCGTGACCACGCCGGAAGTATCGAACGACAAAGCCGTGGTGAAGGTCGCCAGCGAAGTTTGCAATGGCACCAGCGGCGAGACCGACGTGGTTGTCCGCGCCCGGGTGCTGAATGCCAAAGGCAAAGTGGTTCAAACGGCTGAAAGCAAATTGCATCTTCCCGCGAAAGGAATCAACACCGTGGAGCAGTCGCTGGAAGTGCGCTCGCCGAAACTGTGGTCACCGGATTCGCCGGAATTGTATTCGGCGGAAGTTGAAATCACGGCGGCAGGCAAAACGCAGGACAAAACGTCATCTCATTTTGGCATTCGCAAAATCGAAGTGGATGCCGAGCACGGTTTCCGGCTCAACGGCCAGATGCTCAAGCTCAAGGGCGGCTGCCTGCATCACGACAACGGGCCGCTGGGTTCGGCGGCGATTGACCGCGCGGAAGAACGTCGGGTGGAGTTGATGAAGGCGAACGGTTTCAATGCCATTCGCACCAGCCACAATCCGCCGTCGCCCGCGTTTCTCGACGCGTGCGACCGGCTCGGGATGCTGGTCGTGGATGAGGCGTTTGATTGTTGGAACGAAGGCAAAAATCCCGACGACTATCATCTGTATTTCAAGGATTGGGCGCAGCGCGACATTGCTTCGATGGTTGAGCGCGACCGCAATCATCCGTCCGTTGTCATTTGGTCCATTGGTAATGAAATTCCGGAGCAGTTCCGCGACAAAACGACGGCGGAGATGCTGCGCGAAGCCGTGCTCTCACACGACTCCACGCGCCCGATCACACAGGCAATTTGCACCGATTTTGGAAGGGTAATGCGCAATTGGGATCAGCTTTCCGATGTCGCGTTCAAGCACCTCGACATTGGCGGCTACAATTACATGCCTGAAAAATACGAAACCGATCACGCTCGGAATCCAAAGCGCGCGATGATGGCGACCGAATCCTTTCCTAAAGATTGTTTCGATTATTGGTCACAGGTGGAGAAGCATTCTTATGTCATCGGCGATTTCGTCTGGACGGCGATGGACTACTTCGGTGAATCGGGAATTGGCCATACCTCGTTGAGCAATGAGCAGGACACCTTCCTCAAGCCGTGGCCGTGGTTTGACTCCTGGTGCGGGGACATTGACGTATGCGGGTTCAAGAAGCCGCAATCTTATTATCGCGACGTCGTCTGGCGTCGTCGTCAAATTGAAATTGCCGTTCACACGCCGCTGCCGCCTGGTGTCACCGAGCGCGTCAGCAACTGGGGCTGGCCGGATGAAACGCGCAGTTGGACCTGGCCGGGGCAGGAGGGCAAGCCGTTGCAGGTGGCCGTCTATTCGCGTTGCGACGCCGTCCGCCTCGAACTGAACGGCAAGGTGATTGGTGAGAAACCGGTTTCCGCCGCGACCAAACTTACCGCGAAATTCGAAGTGCCTTACCAGCCGGGCGAACTTCGCGCCGTCGGTTTGTCCGATGGCAAGCCCGTCGCGAGCATCGCGTTTCACACGACGGGCAAACCCAGTGCCATCCGGCTTGCGGCTGACCGTTCCACAATTCGCGCCAGCCGCAACGATCTTTCTTATGTGACGGTTGAAGTGGTGGACCAAGACGGCAACCGCGTTCCCAACGCTGCGGTTCCGATCCATTTCACCGTGACCGGCGCGGGTGAACTCGCTGCCACCGGCAACGGTGCGCCGAACGAACCAGCCAGTTTCCAAGCGCCGTTTCGCACGACTTACCAAGGCCGCTGCCTGGCAATTCTCCGTCCGAACGGCGGCGCAGGCAAAATTAAGCTCGAAGCCGAAGCCGATGGTCTGAAGCCGGCGACGGTTATGGTGCAAACCCGATAA
PROTEIN sequence
Length: 995
MNTDVGELGRKFSQNSGSTATRHSLIAEKIMKMKAHRFARLVLFALLAGWCCGALAGDRAANNRDRSFDSGWRFLRADASGAEAPALDDSQWRVLDIPHDWSIEDLPPLKKSSAPELSVVPGQWRFHKSDDMAWKAPAFDDGQWQNVTLPDNWEHHSNYTNDNVYGWFRRRIEIPASLKGKDFDLLLGCIDDVDETFLNGQRIGGMGSFPPNFQTAWDKQRCYHVPASLVRGDGSDVIAVRVFDGGGNGGIYEAGVKAVRVGPFDTSLSEGGASTGHVVGGTGWYRKHFTLSPADDGKLMAVRFDGVYMNADTWINGHLLGNHPHGYTSFEYDLTPYLKPAGQENIIAVRVRNDGKNSRWYSGSGIYRHVWLTVRNPIHIPTWGVFVTTPEVSNDKAVVKVASEVCNGTSGETDVVVRARVLNAKGKVVQTAESKLHLPAKGINTVEQSLEVRSPKLWSPDSPELYSAEVEITAAGKTQDKTSSHFGIRKIEVDAEHGFRLNGQMLKLKGGCLHHDNGPLGSAAIDRAEERRVELMKANGFNAIRTSHNPPSPAFLDACDRLGMLVVDEAFDCWNEGKNPDDYHLYFKDWAQRDIASMVERDRNHPSVVIWSIGNEIPEQFRDKTTAEMLREAVLSHDSTRPITQAICTDFGRVMRNWDQLSDVAFKHLDIGGYNYMPEKYETDHARNPKRAMMATESFPKDCFDYWSQVEKHSYVIGDFVWTAMDYFGESGIGHTSLSNEQDTFLKPWPWFDSWCGDIDVCGFKKPQSYYRDVVWRRRQIEIAVHTPLPPGVTERVSNWGWPDETRSWTWPGQEGKPLQVAVYSRCDAVRLELNGKVIGEKPVSAATKLTAKFEVPYQPGELRAVGLSDGKPVASIAFHTTGKPSAIRLAADRSTIRASRNDLSYVTVEVVDQDGNRVPNAAVPIHFTVTGAGELAATGNGAPNEPASFQAPFRTTYQGRCLAILRPNGGAGKIKLEAEADGLKPATVMVQTR*