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berkeley_reactor_200306_planktonic_scaffold_158606_140

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 184974..186578

Top 3 Functional Annotations

Value Algorithm Source
Xylan 1,4-beta-xylosidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKP2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 498.0
  • Bit_score: 642
  • Evalue 2.00e-181
glycoside hydrolase similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 531.0
  • Bit_score: 684
  • Evalue 1.70e-194
Glycoside hydrolase {ECO:0000313|EMBL:AKC82798.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 531.0
  • Bit_score: 684
  • Evalue 8.40e-194

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Taxonomy

Verrucomicrobia bacterium IMCC26134 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1605
ATGACACGAACCATTCATCTGAAACGCGAAATAATCTGCCTGGCCATCGGCCTGGCGACCTGTTTGAACGCCGGTCATCTGCTCGGGGCCGACGCGCCGCTGACACCGCGCCAGATTACCGCCGACCTCCAGCAAACCAACGGCCCGCTCGATACGATGTTCAAGCTCTGCGTGGGCGCGGGCCGCGCGAATGAAGGTCTGCGCGCCGACTGGCAACGGCAATTGACCGAAGCGCATCGCGAGTGCGGTTTTCGATACATCCGCTTTCACGGGTTGTTCGACGACGACATGGGCGTCTATCGCGATTACAACGGCAAGCCGGAATACAACTGGCAATACATTGACGAGCTTTACGATTTTCTCGAACGCATCGGGATGAAACCCTTCGTGGAACTGAGTTTCATGCCCCAGGGCCTCGCTAGCGGTTCCAAAACGATTTTCTGGTATCACGGCAACGTGACGCCGCCGCGCGACATGCAAAAATGGTCGAACTTCATCAAAGCCTTCGTTGAGCACGTCAAAGAACGTTACGGCGACGCTGAAATTAAAAAATGGTATTTCGAGGTCTGGAACGAGCCGAATCTTCACAACGGTTTTTGGACCGGTTCGCAGCAGGATTATTTCAATCTCTACGCCGCCACGGCCCGCGCCATCAAGAGTGTTTCGCCGGATTACAAGGTCGGCGGCCCGGCGACGGCGGGTTGCGGCTGGGTGCCGGAGTTTATTCATTTCTGCGACACCAACCACGCGCCGGTGGATTTCATTTCCACGCACACTTACGGTGTTGATGCCGGTTACCTCGATGAAACCGGCACGCACGGCACGGCGCTTTCCCGCAATCCCGATTCGATTTGGGGTGATGTCAAACGCGTGCGCCGCGAAATTGCCGAATCGGCCATGCCCAAACTGGAACTGCACTTCACCGAATGGAGTTCCTCCTACACGCCCGCCGATCCGTTCCACGACAGCTACCTCAGCGCGGCTTACATTATTGACAAACTCAAAAACTGCGGCGACGCCGCGCAATCCATGTCCTACTGGACTTTCACGGATATTTTTGAGGAATCCGGCCCGCGCTGGGAGGCGTTTCACGGCGGCTTCGGCTTGATGAATTACGAGGACATCAAAAAGTCGTCGTATTATGCGTATCAATTTTTGAACCGGCTCGGCCCGGTGCAATTGAAGGACAACGACTCATCCTCCTGGATTTGCAAGGATAACTCCGGCGGCGTGCAGGCGTTAGTGTGGGATTTCACCAACATCTTTCCGCACACGAACATGATCAATCAGGTTTATTACAAACGTGATTTGCCGTCGCATCCCAAAGACAAAGTGACTTTGGATTTGTCGCACCTGACAAAAGGCAAATACACACTGGAAGTTTACAAGATCGGCTACCGCGTCAACGATGTTTACGACACTTATCGGGACATGGGCTCGCCCGCGCAGTTGACCAAGGCGCAGGTCGCGGAAATAAAATCCAAAAACAACGGCGCGCCGATTGAAAAGCGCACGGTTAAAATCGGCCGCGACGGAAAATTCGAGCAGCAGTTTGATCTGCGTGAAAATGACGTGGTGATGATCACGCTGACGCCGCTGCGCTAA
PROTEIN sequence
Length: 535
MTRTIHLKREIICLAIGLATCLNAGHLLGADAPLTPRQITADLQQTNGPLDTMFKLCVGAGRANEGLRADWQRQLTEAHRECGFRYIRFHGLFDDDMGVYRDYNGKPEYNWQYIDELYDFLERIGMKPFVELSFMPQGLASGSKTIFWYHGNVTPPRDMQKWSNFIKAFVEHVKERYGDAEIKKWYFEVWNEPNLHNGFWTGSQQDYFNLYAATARAIKSVSPDYKVGGPATAGCGWVPEFIHFCDTNHAPVDFISTHTYGVDAGYLDETGTHGTALSRNPDSIWGDVKRVRREIAESAMPKLELHFTEWSSSYTPADPFHDSYLSAAYIIDKLKNCGDAAQSMSYWTFTDIFEESGPRWEAFHGGFGLMNYEDIKKSSYYAYQFLNRLGPVQLKDNDSSSWICKDNSGGVQALVWDFTNIFPHTNMINQVYYKRDLPSHPKDKVTLDLSHLTKGKYTLEVYKIGYRVNDVYDTYRDMGSPAQLTKAQVAEIKSKNNGAPIEKRTVKIGRDGKFEQQFDLRENDVVMITLTPLR*