ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_158606_142

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 188819..190930

Top 3 Functional Annotations

Value Algorithm Source
beta-galactosidase n=1 Tax=Streptomyces acidiscabies RepID=UPI0002881F37 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 663.0
  • Bit_score: 598
  • Evalue 5.70e-168
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EKX68608.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 677.0
  • Bit_score: 593
  • Evalue 3.30e-166
glycosyl hydrolase similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 663.0
  • Bit_score: 589
  • Evalue 7.50e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces ipomoeae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2112
ATGAATCCCCTGAATTCCTATCGCACCAAAGCCGGCTGGCTACCCCTGCTCCTTTGCCTGTTCTCAGTCGTTGCCGCACAAAGCCGGGAAACTTTGCCGCTCAATGACTGGCGTTTTGAATTGAGCGAAGCCACCAACGCCCCCGCGGAAATCCACTTCGACGATTCAACGTGGAAAACCGTGTCCCTGCCCCACACGTGGAACGCGTTCGACGGCGAGTTGGGCGACAAACATTACTTTCGCGGCACCGGCTGGTATCGCGCGCATTTCACGCTGCCCAAGGATGCCGCACACCAACGCGTGCTGCTGGAGTTCGATGGCGCGAGCCTCAGCGCCGAAGTTTTCGTGAACGGCAAACGGCTCGGCGAACACATCGGCGGCTTTGCCCGTTTCCGCTTTGACGCAACGGACGCAGTCAACGTTTCCGGCGACAACCTTGTCGCCGTGCGCGTCAACAACGCCAGCACCGATTACATTCCGCGCAATGGCGACTTCACCATGTTTGGCGGCCTCTATCGTCCGGCGCGCGTGCTGCTCACATCCACCGCGCACATTGCCACGCTGGATCACGCTTCACCGGGCGTCTTCTTGACGGCAACCAATGTCTCAACAGCCCATGCCGACGTGGTTGCGCGCATCGAACTGGCAAACGACGCGGCAAAGAATTTTTCCGGCACCGTGCGTGTCACGGTGAAAACGCCCGACGGCACAAAAGTCATTTCCAAATCGGCGAAAATCAAAATTCCGGCTCATAGCACGGTGGAAACCCAGTTCCCGTTTTCCATTTCGCATCCACACCTGTGGAACGGCGTGGCCGATCCCTTCGTCTATCAAACAACCATTGAGCTTGTCAGTTTGCGCAGAAAAACCGTTGATTCCATTGTGCAACCACTGGGACTGCGCTCTTTCAAGGTGACGCCGGACCAGGGATTTTTTCTGAACGGCGAGCACGTTCCGCTGCACGGCGTCAACCGCCACCAGGACTGGCCGGACAAAGGCTGGGCGATCAGCACCAACAACGTGAAAACCGATTTGCGCATCATGCGGGAAATGGGCGTCAACGCCGTGCGCCTCTGTCATTATCAGCACGCCCAACCGTTTTATGATCTCTGCGATCATGCCGGCCTGGCCGTCTGGGCGGAATTATGTTTCGTCAACAACCCGCCGATGACGCAGGCCGGGCGTGACAACGCCAAGCAACAGTTGATTGAACTGATCCGGCAAAATTACAATCATCCCTCCATTTTCTTCTGGAGCATCGGCAATGAAACCTGGGATGAAAAGGGCAAGCACGTGACAGAAAAGTTGTTGAGGGAACTGGCCGCCATTGCGAAACATGAAGACCCGTCCCGCCTGTCCACCTATGCGTCGCCTTACGGGCTGAATGATCCGCGCAATTTCATTCCGGATGTCATTGCGTTCAACAAATACTTCGGCTGGTATGGCGGCACCTTTCCCGAATTCGGAAAATTCCTGGACGCATTCCACGCGGCGAATCCGCAGGTGTCCGTCGGCGTCAGCGAATACGGCGCCGGCGCCAGCATCTACCAACACGAAGAAAATCCACAACGACCCAAAACCGATGGCGCCTGGCATCCCGAGGAATGGCAGGCAATCTACCACGAGGCCTGCTGGCTCCAAATCAAGCAACGTCCGTGGCTCTGGGGCAGCTTTGTCTGGTGCATGTTCGACTTCGCCTCCGCCGGCCGCGCCGAGGGCGACACTGTAGGCCGCAACGACAAGGGCCTCGTGACCGCCGACCGGCAGACGCGCAAGGACGCCTTTTATTGGTATCAGGCCAACTGGACAACCAACGCCATGGTCCACATCACGTCCAAGCGATTTTGGGACCGCACGCGGGCGAAAACTGAATTGAAAATCTATTCCAACGGCGATGCCGTCGAGGCTAAGCTGAACGACGTTTCGCTCGGCAAAAAATCTTCCGCCGACTGCCGCTTCGTGTGGCCGCAGATTGAATTAAAGCCGGGCGTGAACCGCATCGTCGCCATCGCCTACCGCGCGGGCGAGCCGGTGGCGACGGATTCCTGCGCGTGGAATTTGTTCACGGAGACAAATACGTCCGAGAATAATCAGAATCCATCCGGGAAATAA
PROTEIN sequence
Length: 704
MNPLNSYRTKAGWLPLLLCLFSVVAAQSRETLPLNDWRFELSEATNAPAEIHFDDSTWKTVSLPHTWNAFDGELGDKHYFRGTGWYRAHFTLPKDAAHQRVLLEFDGASLSAEVFVNGKRLGEHIGGFARFRFDATDAVNVSGDNLVAVRVNNASTDYIPRNGDFTMFGGLYRPARVLLTSTAHIATLDHASPGVFLTATNVSTAHADVVARIELANDAAKNFSGTVRVTVKTPDGTKVISKSAKIKIPAHSTVETQFPFSISHPHLWNGVADPFVYQTTIELVSLRRKTVDSIVQPLGLRSFKVTPDQGFFLNGEHVPLHGVNRHQDWPDKGWAISTNNVKTDLRIMREMGVNAVRLCHYQHAQPFYDLCDHAGLAVWAELCFVNNPPMTQAGRDNAKQQLIELIRQNYNHPSIFFWSIGNETWDEKGKHVTEKLLRELAAIAKHEDPSRLSTYASPYGLNDPRNFIPDVIAFNKYFGWYGGTFPEFGKFLDAFHAANPQVSVGVSEYGAGASIYQHEENPQRPKTDGAWHPEEWQAIYHEACWLQIKQRPWLWGSFVWCMFDFASAGRAEGDTVGRNDKGLVTADRQTRKDAFYWYQANWTTNAMVHITSKRFWDRTRAKTELKIYSNGDAVEAKLNDVSLGKKSSADCRFVWPQIELKPGVNRIVAIAYRAGEPVATDSCAWNLFTETNTSENNQNPSGK*