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berkeley_reactor_200306_planktonic_scaffold_190120_36

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 44795..46678

Top 3 Functional Annotations

Value Algorithm Source
Immunoglobulin I-set domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPX8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 669.0
  • Bit_score: 243
  • Evalue 5.40e-61
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF58075.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 669.0
  • Bit_score: 243
  • Evalue 7.60e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 273.0
  • Bit_score: 112
  • Evalue 4.10e-22

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1884
ATGAAGAAACCCCTTAAAAACCATTGCGGCTTGTTTTTGGCGGCCTGCCTCCTGTCCGGGCTGGCCCTAAATCTTCCCGCGCAACCGGTCACCTTGTCGGGGACCAACTATTTTCAGAACTTTGATGTGGATTATACGTTTGGCCCTCCCGGTGAATGGGTGCTCTACACCGGGGCCAGCGCCACCGCGTTGGGCAACATCGCCGTCATGACGCAGACCGACCCCGCCACCAATAAATGTGCCTGGGCCGATACGTCGGGGGGCTTCAAAAACTATGCGTCCAGCTACAGTTACGAAGGCATGACCAATTTTCTGGGAACGGAACCGATTGACATCCAATCCAACTCGGTCAACCGGGCTTTGGGCGTCCGGCCGGTTGGCTCCACCGACGCCGGCAACGCGTTTGTGCTGAAAGTGGCCAACACCCTGGGCTTTGGCAAATTCAAGCTGGATGTGGACATGCTGCTGTTGAACCCGCAGACCCGTTCCAATTATTGGAACTGTGATTTCGGCGTCAGCCCGGATGGCTTCAGCCCGCCCACCAGCTTCACCCCGGTTTCAAACAATTTCTATTATGCGTTTGGAAATTTTGGCGCCACGCATGAAACCATTGACTTCGGCTCGCTGCTGGATAACCAGCCCGGCCCCATTTTTATCCGCATCTGGAACAGCGCCTCCCAAGGCGGCGGCAGTCGTCCAACCGTGGCGATTGACAACTATAATTTGAGTTTCACCAATGTGGAACAAACCGTCACGTCACCGACCATCACTTCCGCCCCCAACAGCGCCACGGCTTATGTCGGCGACAACTACTCGATGACTGTCAGTGTGGGCGGAACCGCGCCCTTCACGTATCAGTGGTATAAAAATGATTTCAACACGCCGGTGGGCGACGGCACGGACACGCTGCGATTCTCCCAGCTCACCACCGATGACGCGGGCACCTATTATGTGGTGGTATCCAATTCCGCCGGCTCGGCAACCAACAATCCGGGCGCGGTGCTGACCGTGCAAACGCGCGTGCCGATCCCGACCACCATTGCCGCGCTGCGCACCAATCAAGACGACAACGTTTGGACCCCCCTTGACACCACGAATCTTTACACCGTCACCGGCGTGGTGATCAGCCGCGTAAACATGACCACCCCGGCCAATGCCTCCTTTTTCATCGAAGACACCAACAGCGGCTGCGCCATTGATGTCTTTATCGGCGGCGACGCTGCCACCCGTCCGGCCTATGGCGATGTGGTCCAGGTCACCGGCCCGGTTGGCCAATACAATGGCCTCATGGAATTGAACCTGAGCGCTTCCAATCCCACGCACACGGTCAGCGATCTGGGGCCCAGTGGCTACGATGTCCCCGCCAAGCCGTTTGCCTTTGCCAGCATGAGTGACGTTCCGTTCATGGAAACCAATGTGGAGAGTTCGCTGGTTGTGGTTTCCAATGTTTTTATCCAAAACGGCGGAACCGGCGCTAGTTTTGCCAGTGGCAACCTGATCCTCACCAATCAGGCGAATCAAACGTTCACACTCTACATTGACAGCCGCCTCACGGACATCATCGGCCAGCCCATTCCGGGCGGACCGGTCAATATCACCGGCTACATGTCGCAGTTTGATTCCGCGTCGCCTTATACCGCCGGCTACGAACTCATTCCCACTTATGCCGGCGCCATCGTAAGCGCGCCGCCCATCGTCACCCCCATCCCGTTGGTGTTTAGCACTGATGGCGGAGGGCTTACCTTGTCGTGGACGGATGCGTCCTTCACGTTGCAATCGTCCACCAACGTCTCCGGGCCTTACACGGACGTCAACGGGGCCACCAACCCTTACAGCCCGGACACGAGCTCGGGCTCCACATTCTTCCGGCTTTACCATCCTTAA
PROTEIN sequence
Length: 628
MKKPLKNHCGLFLAACLLSGLALNLPAQPVTLSGTNYFQNFDVDYTFGPPGEWVLYTGASATALGNIAVMTQTDPATNKCAWADTSGGFKNYASSYSYEGMTNFLGTEPIDIQSNSVNRALGVRPVGSTDAGNAFVLKVANTLGFGKFKLDVDMLLLNPQTRSNYWNCDFGVSPDGFSPPTSFTPVSNNFYYAFGNFGATHETIDFGSLLDNQPGPIFIRIWNSASQGGGSRPTVAIDNYNLSFTNVEQTVTSPTITSAPNSATAYVGDNYSMTVSVGGTAPFTYQWYKNDFNTPVGDGTDTLRFSQLTTDDAGTYYVVVSNSAGSATNNPGAVLTVQTRVPIPTTIAALRTNQDDNVWTPLDTTNLYTVTGVVISRVNMTTPANASFFIEDTNSGCAIDVFIGGDAATRPAYGDVVQVTGPVGQYNGLMELNLSASNPTHTVSDLGPSGYDVPAKPFAFASMSDVPFMETNVESSLVVVSNVFIQNGGTGASFASGNLILTNQANQTFTLYIDSRLTDIIGQPIPGGPVNITGYMSQFDSASPYTAGYELIPTYAGAIVSAPPIVTPIPLVFSTDGGGLTLSWTDASFTLQSSTNVSGPYTDVNGATNPYSPDTSSGSTFFRLYHP*