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berkeley_reactor_200306_planktonic_scaffold_204825_40

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(48307..49443)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G433_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 360.0
  • Bit_score: 320
  • Evalue 1.60e-84
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 360.0
  • Bit_score: 320
  • Evalue 4.50e-85
Tax=RBG_13_Deltaproteobacteria_61_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 365.0
  • Bit_score: 326
  • Evalue 4.10e-86

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Taxonomy

RBG_13_Deltaproteobacteria_61_14_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
GTGAATAAATCCCTTTTTGTCACATCCCTGATTTTGGCGCTGGCGCTGGCCGGCGGCTGTTCGCAAAAACCGGCGCCACGGCCGGCCGTCGGCGTGCCGGTGCTGGTGGCGCAGGCGGTGGTTACCAATGTGCCGGTGCTGATTGATCCGCCGCCGGTGGGACATGTCACGCCGTTGCAAACGGTCAATGTGCGCCCGCAGATCGGCGGCATCATCAGCGCGGTCCATTTCAAGGAGGGCCAGGAGGTCAAGCAGGGTGATTTGCTGTTCACGATTGATCCGCGCCCGGCGCAGGCGGCGCTGGAACTGGCCCGGGCCAACGCCCGGCGCGACGAGGCGCAACTGGTCAACGCGAAAATCCAGTTTGAGCGCGACCAAAAACTGTTCGAGCAAAACTTGATTTCGCAGGACGTTTTCGACACCAGCAAGGCGACGGTGGACGGTTCGGCGGGCACGGTGGAGGCCGATCACGCGGCGATCACGAACGCGGAGTTAAACCTGCAATACACGGAGATTCGCGCGCCGATTGACGGCCAGACCGGGAGCATTTTGTTTCATACCGGCAATGTCGTGAAGTCGCCCGATGACATTCTGCTCACCATCAACCGCATTCATCCGATTTACGTGGAGTTCGCCGTGCCGGAGCAGTATCTGCCGGAAATCCGCAAGGAGATGAGGGAACGGCCGCTGCCGGTGGCGGTGGCGTTTCAAGACCTGAACGCGCCTTCGCCGCAGGGCAAACTCACGTTCATCAACAACAGCGTGGATGAATCCACCGGCACCATCGAACTCAAGGCGACGTTTCCCAACAAAGACGGCAGTCTCTGGCCGGGACAATTCGTGAATGTGAACCTGACGCTGGCGGAATTGACCAACGTCGTCGTCGTTCCGTCGCAGGCGATTCAGACCGGCCAGGACGGCGAATTTGTTTTTGTCGTCAAACCGGATCACACCGCGGCGCAACAGCCCGTGACCGTGGGCCTGACGTATCGGGGCGAAACCGTGGTGCAAAAAGGAATTCAGCCGGGTGAAACCGTGGTGACCGACGGCCAGTTGCGCCTGACGCCCGGCATTGCGGTGAGCATCAAGGGTTCGCTTGAGGCCGCCTTGCCCGACAAGGACACCAGCGCCCAATGA
PROTEIN sequence
Length: 379
VNKSLFVTSLILALALAGGCSQKPAPRPAVGVPVLVAQAVVTNVPVLIDPPPVGHVTPLQTVNVRPQIGGIISAVHFKEGQEVKQGDLLFTIDPRPAQAALELARANARRDEAQLVNAKIQFERDQKLFEQNLISQDVFDTSKATVDGSAGTVEADHAAITNAELNLQYTEIRAPIDGQTGSILFHTGNVVKSPDDILLTINRIHPIYVEFAVPEQYLPEIRKEMRERPLPVAVAFQDLNAPSPQGKLTFINNSVDESTGTIELKATFPNKDGSLWPGQFVNVNLTLAELTNVVVVPSQAIQTGQDGEFVFVVKPDHTAAQQPVTVGLTYRGETVVQKGIQPGETVVTDGQLRLTPGIAVSIKGSLEAALPDKDTSAQ*