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berkeley_reactor_200306_planktonic_scaffold_204825_92

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 105430..109803

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 1440.0
  • Bit_score: 1843
  • Evalue 0.0
Multi-sensor hybrid histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP29_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 1440.0
  • Bit_score: 1843
  • Evalue 0.0
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 1475.0
  • Bit_score: 877
  • Evalue 3.70e-252

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4374
ATGTGGTGGACAATTTCCTGCAAGGCGAACGAACTTGAGCTCATGACCATTGCCAAACGACTGTTTCTGTTGCTGGCGTTCCCGCTTCTGGCCCTGATCGGACTGGCCACCTTCACGCGTTTCCAACTGGCCCGGATTGAAACGCAAAGCCGTTTCGTGGTGGACTCGCAGATGGTGAGCCTCGCGGTGGTGGGCGACATCGCCCAAACCTACTCGGAAATGCGCATCAATGTGCGCCGTTACTGCATGGAGACGAATTCCGCCGGGCGCGCCGCGGCCGCCGCCGAATTCGCCGGGAGCGAACGGACGTTGAAGCAGCGGCTGCGGGAATATGGCGACGCGATGGTCACCGATGATCGTGACCGCCGGCTTTACGCGGAATACCAGCGGCTCAGTGAAACGTGGACGCGGGGTGCGCAGGAAGTTTTTGCCGCCGCGCAGTCCGGGCGGCAGGAGGACGCGATAACCCGGCTCAACGGCGCGATGGCGGAGGTGGGGGAGGAGCTCAGCCGGGCGTCGCGCGACTGGGTCGCGCATAACAAGGAGCTGGCGGCCGCCGCCGGCCATGATGTGGTGGCCGCCGTCGAAGAATTCCGCCTGCGCATTTTCATCGCCAACTCGACCGCCATTATTTTGACCCTGATCCTGGGCTATTTGACGTTCCGCCGCATTGCCACGCCCATTCGCGCCCTGGACAACACGGTGCGCGGGATCGCGGCCGGCGACTACGCGAAGGACGTTCCGTTCACGAAATCCACGGATGAAACCGGCGGGCTGGCGCGTTCGATAGACGTGCTCAAACAGGGCGCCGCCGAGATGGATGAACAACGCTGGGTGAAATCCAGCGCCTCGAAAATCACGGCGGATTTGCAGGGGGCGGCGGCGTTTCCTGAATTTGGCCGGCGCCTGCTCTCCGGCCTGCTGCCGCTGCTCGACGGCGGCGTGGCGGCAGTTTATCTGTTCGACGAAAGTTCCCGGACGCTCCGCCGCATCGCCGCCTCCGGCCTGGCCGACGGCGACGCGAATGACTCGTTCAAATTGGGCGACGGACTGGTCGGCCAATGCGCCAAGGAACGCCGGCCGATGACGTTTTCCAACCTGCCGCCCGGTTACCTGCGGCTGGCCTCCGGCTTGGGCGGCGCGGCGCCGACGCTGGCGGTGGCGCTGCCGCTGTCCGCTGCGGACACGCTGCTCGGCGTGGTGGAGTTCGCGGCCTTCGGGCAATTCAGCTCGCGCCAGCGGGCGTTGCTGGATGAATTGCTGCCGCTGGCGGCGATGAACCTGGAAATACTGAAGCGCAACCTGCGCACGCAGGAACTGCTCGACCGGGTGCGGGCCACCGAGGAACGCACGCGGCTCATCCTCGAATCCAGCGCCGAGGGTGTCTTCGGCACGGATACCGAGGGAAAAATCACCTTTGTCAACCCGGCCGCCTGCCGGATGCTGGGGTTCACGGCGGAAGAACTGGTCGGCCGGCCGTCGCACGCCACGTTCCACCAACGGCGCCCGGATGGCAGCGAATACCCGGTGGCGGAGTGCCCGATGTTTGCGGCCCACCAGCATGGCCGGACCAGCCGCGTGGACAACGAATGCCTCTGGCGCAAGGACGGCACCGGCGTGCCGGTCGAGTATGGCGCGACGCCGATCATGAAGGACGGCCACATCGTCGGCTCGGTCGTTACGTTCACGGACATCACGGAACGCAAGCGCGCCGAGCGGGAGCTGTCGTTTCGCTTCGCCTTCCAGCAGGCGCTGCTGGAATCCATTCCCTATCCCATGTTCATGAAGGATGCCCGGGCGAGATTTTTGGGCTGCAACCGGGCGTATGAACGCGAGTTCAACACGACGGCCGACGCGCTCAAGGGCAGGACGGCGCTGGAACTGGAATATCTGCCGGAGGCGGAGCGCCGGAAATTTCATGACGAGGACACCACCGTCATCCGGGAGGCCGGGCGGCGCAGTTATGAACTGCCCATTCGATACGCCGATGGTCAGACGCACATCACGCTCTACTCGGTGGACGGATTTAAATTATCGGACGGCACGCCGGGCGGTTTGATCGGGCTGTTGGTGGACATCACCGACCAGAAGCGCGTGGCGGAGGAATTGCTCGTCGCCAAGGCCAGGGCCGAGGAGGCCACGCAGATGAAATCCATGTTCCTCGCGAACATGAGCCACGAAATCCGCACGCCGATGAATGCCATCATCGGCCTGTCGCACCTCGCGCTGAAGACCGACCTCACGCCGAAACAGCGGGATTATGTGTCCAAGGTTCACAACGCCGGCACGTCGTTGCTCACCGTCATCAACGACATCCTCGATTTTTCCAAGATCGAGGCCGGCAAACTGGACCTGGAAACGACGGATTTCAAACTGGATGAAGTCATTGCGAGCGTCACCACCCTGACGGCGCAGAAAGCCCACGAGAAAGGGCTGGAATTTCTGGCGCACGTCGCGCCCGGCATTCCCGACGGGCTGCTCGGCGACCCGCTGCGGCTGGGCCAGATCCTCACGAACTTTGTCAACAACGCCGTCAAATTCACCGAGCGGGGGGAGATCCGGCTCGAAATCGAGCTGCTTGAACGCACCGGCGAAAAGGTGCAGTTGAAGTTTTCCGTGCGCGACACCGGCATCGGCATGACGCCGGAACAGGCGGCGAAATTGTTCCAGCCCTTCACGCAGGCCGACATGTCCACCACGCGCAAGCACGGCGGCACCGGCCTGGGCCTCACCATCTGCCAGCGGTTGGTGGACTTGATGGGCGGACGCATCTGGCTCGAAAGCGCGCCCGGCGCGGGCAGCACGTTTTATTTCACCGTCTGGCTCGGCATTGGTTCGGCCACGGGAACCGGCAAAGTCATTCCGGAAAAATTGACCCGGCTTCACGTGCTGGTGGTGGATGACAACCCCACGGCCTGCGAAATTTTACAGGAACCGCTCCTGGGGATTGTCCGGCAGGTGGACGTCGCCGCCTCCGGCCGCGAGGCCATCGCGGCCATCCGGCAGCACAGCGCGGGCGATCCGTATGACATCATTTTCATGGACTGGCGCATGCCGGACATGGACGGATTGCAAACCAGCCGCTACATCAAGAGCGACGAAACCCTGCCCCGCGTGCCGCACATTGTGCTGGTCACGGCGTTTGGACGGGAGGAAGTTCGCGAAGAGGCGGAACGCCTGCAACTGGACGGGTTTCTCGTCAAGCCGGTCACCAAGTCCATGATCGTTGACACCCTGGTCAATGTCTTTGCCGAAGAGGGCGAGGCCGCGACGGCGGCGGCGGAAACCCCGCACACGGCGCGGCTGCGGGGCGCGCGCATTTTGCTGGCCGAGGACAACGAAATCAACCAGCAGATCGCCGTCGAATTGCTGGCCGGCGCGGGCGCCACTGTCCAGGTGGCCCACAATGGCCAGGTGGCGGTGCGGCTCTTGACGGACGGCCCGAAACCGGCGCCGTTCGATGTGGTGCTGATGGATTTGCAGATGCCGGAAATGGACGGTTATCAGGCGACCGCCCGGCTCCGGGCCGATCCGCAGTTCGCCAAACTGCCCATCATCGCCATGACCGCGCACGCCACCATCGAAGAACGCCAGCGCTGCCTCGACGCCGGCATGAACGACCACATTTCCAAGCCGATTGATCCGGACAATTTATACGAAACGGTGGGGCGTTTTTTCAAACCGGCCAGGCCAGTCGAAGCGGCCCCGGCATCGCGGCCGGCCGGTGGCGCCGGTGCGAAGCCGGAATCGCCGCCGGCGCCGCGGGACGCCTTGTCCGCGGTTCCCGGCCTGGATGCCGGCGACGGCCTGTCGCGGGTCGCGGGCAATCGCAACCTTTATCTCAAACTGCTCCGGCAGTTTGTCGAACAACACGGTTCGGCGGTGGCGCAAATCCACGAGGCGCTGGCAAACGGCGACCGCGCCTTGGCCGAACGCATCGCGCACACGCTCAAGGGCGTTGCCGGCAATGTCGGCGCCAGGCCGGCGCATGCGGCCGCGGCCGCGCTGGAAAAAGGCATCCGCACCGCGGCACCGGCCGGCGAGCTGGCAGGCTTGAAACAACAACTGGCTGCCGCGCTGGATTCGTTGGTGCCGGCCCTGCGCCCGGTGCTGGATTCGACGCCGGCGGAAACGGTTGCGTCAGCGCCGCCGCTGCCGCTTGACAGCGTGCCGCCGCGCGAAGTCGCGGCGCAACTGGCGCGGTTGTTGGCGGAGTTCGATCCGGGCGCGGCCGATTACATCGCCGCCCATCAGGCCGCGCTGCGTCCGTTGTTTGCGGACACCGCCTGGCCGGAATTTGAGCGCCTCGTGCAAGGTTATGCGTTTGCCGAGGCGGAGACGCGGTTGAACGAGGCATTGAAGGAGGTTCCCTGA
PROTEIN sequence
Length: 1458
MWWTISCKANELELMTIAKRLFLLLAFPLLALIGLATFTRFQLARIETQSRFVVDSQMVSLAVVGDIAQTYSEMRINVRRYCMETNSAGRAAAAAEFAGSERTLKQRLREYGDAMVTDDRDRRLYAEYQRLSETWTRGAQEVFAAAQSGRQEDAITRLNGAMAEVGEELSRASRDWVAHNKELAAAAGHDVVAAVEEFRLRIFIANSTAIILTLILGYLTFRRIATPIRALDNTVRGIAAGDYAKDVPFTKSTDETGGLARSIDVLKQGAAEMDEQRWVKSSASKITADLQGAAAFPEFGRRLLSGLLPLLDGGVAAVYLFDESSRTLRRIAASGLADGDANDSFKLGDGLVGQCAKERRPMTFSNLPPGYLRLASGLGGAAPTLAVALPLSAADTLLGVVEFAAFGQFSSRQRALLDELLPLAAMNLEILKRNLRTQELLDRVRATEERTRLILESSAEGVFGTDTEGKITFVNPAACRMLGFTAEELVGRPSHATFHQRRPDGSEYPVAECPMFAAHQHGRTSRVDNECLWRKDGTGVPVEYGATPIMKDGHIVGSVVTFTDITERKRAERELSFRFAFQQALLESIPYPMFMKDARARFLGCNRAYEREFNTTADALKGRTALELEYLPEAERRKFHDEDTTVIREAGRRSYELPIRYADGQTHITLYSVDGFKLSDGTPGGLIGLLVDITDQKRVAEELLVAKARAEEATQMKSMFLANMSHEIRTPMNAIIGLSHLALKTDLTPKQRDYVSKVHNAGTSLLTVINDILDFSKIEAGKLDLETTDFKLDEVIASVTTLTAQKAHEKGLEFLAHVAPGIPDGLLGDPLRLGQILTNFVNNAVKFTERGEIRLEIELLERTGEKVQLKFSVRDTGIGMTPEQAAKLFQPFTQADMSTTRKHGGTGLGLTICQRLVDLMGGRIWLESAPGAGSTFYFTVWLGIGSATGTGKVIPEKLTRLHVLVVDDNPTACEILQEPLLGIVRQVDVAASGREAIAAIRQHSAGDPYDIIFMDWRMPDMDGLQTSRYIKSDETLPRVPHIVLVTAFGREEVREEAERLQLDGFLVKPVTKSMIVDTLVNVFAEEGEAATAAAETPHTARLRGARILLAEDNEINQQIAVELLAGAGATVQVAHNGQVAVRLLTDGPKPAPFDVVLMDLQMPEMDGYQATARLRADPQFAKLPIIAMTAHATIEERQRCLDAGMNDHISKPIDPDNLYETVGRFFKPARPVEAAPASRPAGGAGAKPESPPAPRDALSAVPGLDAGDGLSRVAGNRNLYLKLLRQFVEQHGSAVAQIHEALANGDRALAERIAHTLKGVAGNVGARPAHAAAAALEKGIRTAAPAGELAGLKQQLAAALDSLVPALRPVLDSTPAETVASAPPLPLDSVPPREVAAQLARLLAEFDPGAADYIAAHQAALRPLFADTAWPEFERLVQGYAFAEAETRLNEALKEVP*