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berkeley_reactor_200306_planktonic_scaffold_204825

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Displaying items 91-104 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_204825_90
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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102431..103600
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y06_SOLUE
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
berkeley_reactor_200306_planktonic_scaffold_204825_91
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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103755..105467
DNA (1713bp) protein (571aa)
Sulfate transporter n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8K1_9BACT
Sulfate transporter {ECO:0000313|EMBL:EDY17223.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sulfate transporter
berkeley_reactor_200306_planktonic_scaffold_204825_92
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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105430..109803
DNA (4374bp) protein (1458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP29_9BACT
PAS domain S-box
berkeley_reactor_200306_planktonic_scaffold_204825_93
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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109805..110950
DNA (1146bp) protein (382aa)
Response regulator receiver modulated serine phosphatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP30_9BACT
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:EEF58386.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative chemotaxis response regulator
berkeley_reactor_200306_planktonic_scaffold_204825_94
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

111058..111492
DNA (435bp) protein (145aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP31_9BACT
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:EEF58387.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_204825_95
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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111556..111939
DNA (384bp) protein (128aa)
Anti-sigma factor antagonist n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP32_9BACT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anti-sigma-factor antagonist
berkeley_reactor_200306_planktonic_scaffold_204825_96
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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112064..113146
DNA (1083bp) protein (361aa)
pfkA2; protein PfkA2 (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G4L1_9DELT
Tax=RBG_16_Planctomycetes_64_10_curated
berkeley_reactor_200306_planktonic_scaffold_204825_trna_1
unknown

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113540..113611
DNA (72bp)
transferRNA Thr
berkeley_reactor_200306_planktonic_scaffold_204825_97

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113948..114745
DNA (798bp) protein (266aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Thymidylate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJM3_9BACT
thymidylate synthase
berkeley_reactor_200306_planktonic_scaffold_204825_98
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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114747..115967
DNA (1221bp) protein (407aa)
Aminotransferase class V n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBQ6_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EEF62941.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
isopenicillin N-epimerase
berkeley_reactor_200306_planktonic_scaffold_204825_99
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

115964..116554
DNA (591bp) protein (197aa)
dhfrIII; dihydrofolate reductase type 3 (EC:1.5.1.3)
Dihydrofolate reductase region n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D395_9BACT
Dihydrofolate reductase region {ECO:0000313|EMBL:EDY19206.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_204825_100
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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116994..117515
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00035D5986
murein transglycosylase
Tax=RBG_16_RIF_WS3X_71_46_curated
berkeley_reactor_200306_planktonic_scaffold_204825_101
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(117643..119316)
DNA (1674bp) protein (558aa)
30S ribosomal protein S1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHG4_9BACT
Ribosomal protein S1 {ECO:0000313|EMBL:EEF60799.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S1
berkeley_reactor_200306_planktonic_scaffold_204825_102
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(119780..120673)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSA2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57272.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying items 91-104 of 104 in total

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