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berkeley_reactor_200306_planktonic_scaffold_198771_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(16836..17993)

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 386.0
  • Bit_score: 633
  • Evalue 1.60e-178
Carbamoyl-phosphate synthase small chain n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKW2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 386.0
  • Bit_score: 633
  • Evalue 1.10e-178
carbamoyl-phosphate synthase small subunit similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 382.0
  • Bit_score: 447
  • Evalue 3.30e-123

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1158
ATGAAAGCGATTTTAGCCCTCGAAGACGGTTCCATTTTTCACGGCACAGGTTTTGGCGCCAAAGCTTCCGCCGCCGGCGAAGTTTGCTTCAACACCTCGATGACGGGCTACCAGGAAATTCTCACCGACCCCTCCTACAAGGGGCAGATTGTGACGATGACGTATCCGCTCATCGGCAATTACGGCGTCAACGAGGTGGACATCGAATCGTGGCGGCCGCACGCGGCGGGCTTCGTCGTGCGCGAACTGTCGCCCATCGTCAGCAACTGGCGCGCGGATTATTCGCTGGCGGAATATTTGGAAAAGAACGGCATCCCCGGCATTCAAGGCATTGACACGCGGTCGCTCACCAAAAAACTGCGGGTGCGCGGCGCGATGAACGGCTTCATCTCCACCGAGGAAATCTCCGATGCGGAAGCCGTCAAACGCGCCAAGGAATTTGTTTTTGTCGGCGTGGATTACGTCAAGGAGGTCACGCACAAACAGGCGTTCACCTGGGACGAAAAAGACGAGCAAAGCGCGGCGTTCGATCTCGTGCGGGGCAACAAAGTGGCCGAGGCGCGCCAGTTTCGCAAACCGCTTCCGCCGGCGGACATTCCGATTGTGGCATTTGATTACGGGATGAAATACAACATCCTTCGCCGCCTGCGGCAGCACGGTTTCCGTGTGCAGGTGCTGCCCGCCACCGCCACCGCCGCGGACGCGCTCAAGCACAAGCCCGCCGGCATTTTTCTGTCCAACGGCCCCGGCGATCCTTCCGCGCTTCCTTACATCGTGCGCGAAGTGAAAACGCTGCTCGATTCCGGCGTGCCCATGTTTGGCATTTGCCTTGGCCATCAGATTCTCGGACAGGCGCTGGGCGGCAAAACCTTCAAGCTGAAATTCGGCCATCGCGGCGGCAACCAGCCCGTGAAAGATCTCGAAACCGGCAAGGTGGAAATCACGTCCCAAAATCACGGATTCGCCGTGGACGCCAAATCATTGCCCGCCGACGTGGCCGTGCATCGCATCAACCTCAACGATCAAACCGTGGAAGGTTTGCGGCACAAAACCAAGCCGGTTTTCTGCGTGCAATATCATCCAGAAGCCTCGCCCGGACCGCACGACTCCACGCCGTTGTTCGCGGAATTCTGGCAGTTGATCGAAAAGCGCGGGTGA
PROTEIN sequence
Length: 386
MKAILALEDGSIFHGTGFGAKASAAGEVCFNTSMTGYQEILTDPSYKGQIVTMTYPLIGNYGVNEVDIESWRPHAAGFVVRELSPIVSNWRADYSLAEYLEKNGIPGIQGIDTRSLTKKLRVRGAMNGFISTEEISDAEAVKRAKEFVFVGVDYVKEVTHKQAFTWDEKDEQSAAFDLVRGNKVAEARQFRKPLPPADIPIVAFDYGMKYNILRRLRQHGFRVQVLPATATAADALKHKPAGIFLSNGPGDPSALPYIVREVKTLLDSGVPMFGICLGHQILGQALGGKTFKLKFGHRGGNQPVKDLETGKVEITSQNHGFAVDAKSLPADVAVHRINLNDQTVEGLRHKTKPVFCVQYHPEASPGPHDSTPLFAEFWQLIEKRG*