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berkeley_reactor_200306_planktonic_scaffold_198771_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(26539..27498)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SLQ8_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 244.0
  • Bit_score: 144
  • Evalue 1.00e-31
Peptidase C54 {ECO:0000313|EMBL:KGB83496.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 213.0
  • Bit_score: 149
  • Evalue 4.40e-33
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 220.0
  • Bit_score: 140
  • Evalue 5.40e-31

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Taxonomy

Rhodovulum sp. NI22 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGAATTACCGGACGCAGCGGCTTCCGATTGTCACCCTGTCGCTCATCGGCCTCAACACGCTGGTCTATCTGGTTTCACTGATGTTCGCCGTGGCCACCCACGGCCAATCCAATCTTTGGATTTATGAACATCTCTGGCTGATTCCGGCGAACTGGCATTGGTATGCCAGTTTCACGTCCATGTTTGTTCACGGCGGCCTTTTCCATCTGCTGGGCAACATGATTTTTTTGTTTCTGTTTGGCTGTTGCGTGGAGGACATGATCGGGCGGACGCGCTTTGCCGGGTTTTATTTGCTGGGCGGGCTGGTGGCGGAAATGGTGTTCATCGCCATGGCGCCAAAACATTTTCTGACGCCGAATCCCATGGGTGGCGCGTCGGGTGCCATCAGCGCGTGCATGGGCATGTATCTGCTGCTGCGCACCCGGGCGGACATCGAGTTCAAATACGTTTACTTTTTCTTCTTGCGGTTTGGGGCCGGTGAATTTTCCGTGCCGGCCTGGGCGGTCATTCCGTTCTGGTTTTTGAAAAATTTATTCTGGGCGGTGCTCGGCATGCGCGCCACTGGAATCAGCGGCGGCGTGGCCTTCGGCGACCATGTGGGCGGCTTTCTGGCCGGGTTCGCCGCCATCGGCATTTACAAGCTGGCGGGCAAACCCCACGATGTCGAAGCAACCGGGGAAGCGGAGGACGACGACGACGAAAAACTTCCAACGCAACCGCCGCGCGCCGGCAAACGTCCGCCCATGCGAATTCATCTGCGGCCGGCGCCGGTGGCCGTCGTCACGGAAACGCCGACCATTTTTCTTCACGATGGAATCGCTCAATCCGGGCCGTTTACGCTGTCGCAGGTGCAGGCGATGCTGCACGCGGGCGGTGTTCATCCGGGAACGCAATACTGGAGCGAGGGCCTGGATGATTGGCAGGACATTGCGGATTTGTCGGATCAACCGGGCGGATAA
PROTEIN sequence
Length: 320
MNYRTQRLPIVTLSLIGLNTLVYLVSLMFAVATHGQSNLWIYEHLWLIPANWHWYASFTSMFVHGGLFHLLGNMIFLFLFGCCVEDMIGRTRFAGFYLLGGLVAEMVFIAMAPKHFLTPNPMGGASGAISACMGMYLLLRTRADIEFKYVYFFFLRFGAGEFSVPAWAVIPFWFLKNLFWAVLGMRATGISGGVAFGDHVGGFLAGFAAIGIYKLAGKPHDVEATGEAEDDDDEKLPTQPPRAGKRPPMRIHLRPAPVAVVTETPTIFLHDGIAQSGPFTLSQVQAMLHAGGVHPGTQYWSEGLDDWQDIADLSDQPGG*