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berkeley_reactor_200306_planktonic_scaffold_198771_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 35342..35740

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036CBF19 similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 123.0
  • Bit_score: 112
  • Evalue 3.00e-22
Response regulator receiver protein {ECO:0000313|EMBL:EEF59371.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 122.0
  • Bit_score: 110
  • Evalue 9.50e-22
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 118.0
  • Bit_score: 104
  • Evalue 1.40e-20

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 399
ATGAGTTATGTTCACAGAATGGTGCCGCGCATTTTGATCGTGGACGATGAGGGTGATTTCGTCGAATTGGTGAAATTTCGCCTGGCGAACTTGGGCTGCGAATTTCTCGTGGCCGGGGATGGTGTCCACGCGTTGAGCCAGGCGCGGCAGTTCAAGCCGGACCTCATTTTACTGGATATTTTGCTGCCGGACTTGGACGGGTTGTCGGTTTGCGAGATTTTGAAGCGTCAGCCGGCGACCAAAAAAATTCCCATTATTTTCATGAGCGCGCTGACCGGCGATGTGACCAAACGCACGGCGGCCATGAATGCCGAGGATTTCTTCACCAAGCCGCTGGATTTGAACCGGCTGGAAAAGCGGATTGCGGAACTGCTGCACACGGGGATTGCCGCCAACTGA
PROTEIN sequence
Length: 133
MSYVHRMVPRILIVDDEGDFVELVKFRLANLGCEFLVAGDGVHALSQARQFKPDLILLDILLPDLDGLSVCEILKRQPATKKIPIIFMSALTGDVTKRTAAMNAEDFFTKPLDLNRLEKRIAELLHTGIAAN*