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berkeley_reactor_200306_planktonic_scaffold_198771_149

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 183517..184200

Top 3 Functional Annotations

Value Algorithm Source
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI75_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 227.0
  • Bit_score: 310
  • Evalue 7.60e-82
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit {ECO:0000313|EMBL:EEF60568.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 227.0
  • Bit_score: 310
  • Evalue 1.10e-81
transferase hexapeptide repeat containing protein similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 227.0
  • Bit_score: 231
  • Evalue 1.70e-58

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 684
ATGTTTAAACCGGCCGATTTATTTGACCTTGCCCAGACCGAACACGCCGTTCTTTTCGACGGCTGCACGCACGCCTGGGAGGCGCTGAAGAAAATTGAATCGTATCTCGCCAAAGTCACCCGCCAGAATCCGCCCAAACGCTTTCCCGGCGCGTCCATAGACGAACGCGTCATCATCGGCGCCGGCACCGTGGTGGAACCCGGCGTCCTGATCAAGGGCCCGGCCATCATCGGGAAAAATTGTCAGCTTCGCCACAACGCCTACCTGCGCGGGAATGTCATCATCGGCGACGACTGCGTGGTGGGCAACGCCACGGAGCTCAAAAATGCGCTGCTCTTCAACGGCGCGCAGGCGCCGCATTACAATTACATCGGCGATTCCATCCTCGGCCACAAAGCCCACACCGGCGCGGGCGTGATCTGCTCCAACCTCAAGTCGCTGCCCGGCAATGTGACCCTCATGCTGGACGGCCAGCCATTCGACACCGGGCTGCGCAAATTCGGCGCGCTGATCGGCGACGGCGCGGAAGTGGGCTGCAACAGCGTGCTGAACCCCGGCAGCATCCTCGGCCGCGGCGCGCTCATTTATCCCGGCGTAAGCTGGCGCGGCTTTTTACCCGCCAACCACATCGCCAAGAACAAGGCGGAGATGGCAGTCGTGGTGAAAAAGCCCAGGGGAAATTGA
PROTEIN sequence
Length: 228
MFKPADLFDLAQTEHAVLFDGCTHAWEALKKIESYLAKVTRQNPPKRFPGASIDERVIIGAGTVVEPGVLIKGPAIIGKNCQLRHNAYLRGNVIIGDDCVVGNATELKNALLFNGAQAPHYNYIGDSILGHKAHTGAGVICSNLKSLPGNVTLMLDGQPFDTGLRKFGALIGDGAEVGCNSVLNPGSILGRGALIYPGVSWRGFLPANHIAKNKAEMAVVVKKPRGN*