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berkeley_reactor_200306_planktonic_scaffold_226867_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(7143..8006)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJW9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 274.0
  • Bit_score: 235
  • Evalue 5.10e-59
Type II secretory pathway pseudopilin PulG-like protein {ECO:0000313|EMBL:EEF59792.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 274.0
  • Bit_score: 235
  • Evalue 7.20e-59
prepilin-type N-terminal cleavage/methylation domain similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 253.0
  • Bit_score: 91
  • Evalue 2.60e-16

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 864
ATGAACACATCCGCCACCCGAACTCAAACCGGCTGCTTCGCACGGCCCCTGATCCAAAAAAAATCCTCCGGCTTTACGCTCATTGAACTGCTGGTGGTGATTGCCATCATCGCGATTTTGGCGGCGTTGCTGTTGCCGGCGTTGTCCCGGGCCAAGCTGCGGGCCCAGCGCATTGCGTGCGTGAGCAACCTTCACCAGATGGGCCTCGGGAGCCAGATGTATGCGGATGACAATAACGGGGATTATTGCGGCGCCAGTTGGGAGCCGGGCATGATCAGCCATCTCGGCGCTTGGGTTAAGATCTCGGACCGGGACGGCACGGATGATGATTTAAACTGGCTGTATCCCCAATATTGCGCCGCCGTGAAGGCTTTTGTCTGCCCGAGCACGCAAAATTACATCCGCACCACCAACACCGAAGTCGTCAACGGCAAGACTTACCTGCTGGACCTGGCCAACAACGCCCACGCCAAGGATTCCTACGGCACCAGTTACGAAGTGTTCGGCGCCTGGAACAAATACAACGGCGCGAAGCCGCTGGGCAAGAAAACCGAACGCAACGTCAATGCGTTCACCCTGACGGTGGACGCGAAATACACGGGGTTCGACAAGGGAACCAAGCCCGGCCCGGCCCGGATTTTTCTGATTCATGACGCCGACGACAAGGACAAGCAGGGCAACCGTTTCGAGAATTGTCCCGATCCCACCGACAATCACGGCGCCGATGGCGCGAACTTCACCTTCGTGGACGGCCATGCCCAATGGGTGCCGAAAAAATTTTACCAAGCCGTGCTCAACACCTCCGGCGACAGTGACGGAACGCCTCCGGATGGCAGCCCCATCACAGCGCCGTTTTCCTATTAA
PROTEIN sequence
Length: 288
MNTSATRTQTGCFARPLIQKKSSGFTLIELLVVIAIIAILAALLLPALSRAKLRAQRIACVSNLHQMGLGSQMYADDNNGDYCGASWEPGMISHLGAWVKISDRDGTDDDLNWLYPQYCAAVKAFVCPSTQNYIRTTNTEVVNGKTYLLDLANNAHAKDSYGTSYEVFGAWNKYNGAKPLGKKTERNVNAFTLTVDAKYTGFDKGTKPGPARIFLIHDADDKDKQGNRFENCPDPTDNHGADGANFTFVDGHAQWVPKKFYQAVLNTSGDSDGTPPDGSPITAPFSY*