ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_226867_5

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 10768..11160

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 6.20e-20
Response regulator receiver protein {ECO:0000313|EMBL:EEF57195.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 8.70e-20
putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 116.0
  • Bit_score: 82
  • Evalue 9.30e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 393
ATGAAAAGGTTAAAAACAACGTCTGCCGGCGGTCCGCGCCTGCGGATCCTGATTGCGGAGGATTCGCCCGGCACGCGGCACAGCCTGAACGAAGCGTGCTCCAGTTTGCCGCACCTGACGGTGGTCGGCGAAGCGGCGGATGGGCTGGAGACGATTGCCGCGGTGCGCGCCTTGAAGCCGGACGTCCTGACCTTGGATATCAATCTGCCCCGGTTGGGCGGCCTGGAGGTGTTGCGCATCCTGCGGCGCGAGCAGATCGAATGCCGGGTGATCGTGCTGACGTCGCTGGCGGACGAGTTTTACAAAATGAAATGCCGGGAACTCCATGTCCGGCATGTCTTCGACAAAATCACCGAGTATGACCGGTTTCTGGAAGTTTTGAAAGCGATGTAG
PROTEIN sequence
Length: 131
MKRLKTTSAGGPRLRILIAEDSPGTRHSLNEACSSLPHLTVVGEAADGLETIAAVRALKPDVLTLDINLPRLGGLEVLRILRREQIECRVIVLTSLADEFYKMKCRELHVRHVFDKITEYDRFLEVLKAM*