ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_226867_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20754..21224

Top 3 Functional Annotations

Value Algorithm Source
Cyclic nucleotide-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBI0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 143.0
  • Bit_score: 171
  • Evalue 3.80e-40
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EEF62865.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 143.0
  • Bit_score: 171
  • Evalue 5.30e-40
putative Crp/Fnr family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 144.0
  • Bit_score: 127
  • Evalue 3.00e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 471
ATGAAAATTGATACCAACATCCTGGCGGCACAGCTCTTTCTCAAAGGGCTCTCCGCGTCACAACTGGAACTGCTGGCGGAAAACGCCATGCGGGCGGATTTCAAGGAAGGCGAGGCCATTTTTAGCGAGGGTGGCCCGGCCAACCGCTTTTATATTTTGTTGAGCGGTGAAGTCGAGGTGGAATCGCCCTGTCCCTGTTGCGACGATGAACGTGGCTCGACGGCCATTGAAACCATCGGTCCGGGCGATGTGCTGGGCTGGTCCTGGCTGTTTCCGCCGCATTACTCGCACTTCAACGCCCGCGCCGTGTCGCCGGTCACCGCCATTTTTTTCTACGGCACGCGCCTGCGCGAGCATTGCGAAAATGACCACGACCTCGGCTATGAGTTGATGAAGCGGATTGCGCAGATTTTCATCGAGCGATTGCAGGCCACGCGCGAGCAACTGGCCCGGCAAACCAGAAGCGTGTAA
PROTEIN sequence
Length: 157
MKIDTNILAAQLFLKGLSASQLELLAENAMRADFKEGEAIFSEGGPANRFYILLSGEVEVESPCPCCDDERGSTAIETIGPGDVLGWSWLFPPHYSHFNARAVSPVTAIFFYGTRLREHCENDHDLGYELMKRIAQIFIERLQATREQLARQTRSV*