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berkeley_reactor_200306_planktonic_scaffold_226867_30

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(37535..39361)

Top 3 Functional Annotations

Value Algorithm Source
Chloride channel core n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGZ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 595.0
  • Bit_score: 780
  • Evalue 9.10e-223
Chloride channel core {ECO:0000313|EMBL:EEF60913.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 595.0
  • Bit_score: 780
  • Evalue 1.30e-222
chloride channel core similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 584.0
  • Bit_score: 741
  • Evalue 1.70e-211

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1827
ATGCAAACTGACGACATTTCCGCCGCCCCTACCGTTTCCCGCGCAGAAGAACTGGCTGATTTCAGCACCGACCGCAGGGTGCTGTTATTATCCTTCATGGCCCTGATTATTGGCATGGTCAGCGCCCTGGTTGCCTACATATTGATGTGGTTGATTGCAGCAATTACCAATCTGGCCTTTTATCAGCGCTTCTCCAGCGCTTCCGTCGTGCCGCAAGGGAATCACCTCGGATATTGGGTGATCTTGATTCCTGTCATAGGCGCGGTTGTCATCGGGTTGATGGCGCGGTTTGGTTCCGAGAAAATTCGTGGACACGGCATCCCGGAAGCCCTGGAGGCCATTCTCCTAGGGCGCAGTTTCATTTCGCTCAAGGTTGCCATTCTGAAACCGTTGTCTTCCGCCATTTCCATCGGCACGGGCGGACCGTTCGGAGCGGAAGGTCCCATTATCATGACGGGGGGCGCTTTTGGCTCGATTTTCGCCCAGCTTTTTCACTTGAGCGCCGCCGAGCGCAAAACCTTGCTCGTGGCCGGGGCGGCAGGCGGTATGGCCGCCATTTTTGACACCCCGGTCGCGGCGGTTTTGCTGGCCGTTGAGTTGTTGTTGTTTGAATGGAAACCGCGCAGTCTTATTCCCGTGGCGGTGGCGGCGGTCGTCGCGTCCGTCATGCGGGTGCCCTTGCTCGGCAGCGGTCCGGTTTTTCCAACAACACCGCATGCGCCGGTGTCGGGAGAAATCCTGGTGATTGCCGCCGGGGTTGGCCTGCTGGTGGGTTTTGGTGCGGGCTTGATGACCACGCTGGTTTACGCGATTGAAGATCTGTTTCAGAAACTGCCGGTCCATTGGATGTGGTGGCCGGCAATTGGCGCGGTCATTGTTGGGGTTGGCGGTTATTTTGAACCGCGCGTTCTCGGCGTGGGCTACGGCACGATTCACAGCCTGCTGGAAGGACACATTATTGGCGCGGCCATTATCGGCCTGCTCATTGCAAAGGCCCTGGTCTGGACGGTGGCCCTGGGTTCGGGCACGTCCGGCGGCGTGCTGGCGCCGTTGCTCATCATTGGCGGCTCCTTGGGCGCGCTGGCCGGCACCTGGATTCCGGTGGGCGACATCGGGCTGTGGGCGTTGATCGGCATGGCCGCGATGATGGGCGGAACCATGCGGGCGCCGCTGACGGCGATGGTGTTTGCCGTGGAACTCACGCGGGATTTCAATCTCTTCCCTGCGTTGCTGGTCGGTTCAATGGTGGCGTTTGGGGTAATGGTTTTGTTGATGCGCCGCTCCATCCTGACGGAAAAGCTGGCCCGTCGCGGACACCATATCATCTGCGAGTATAGCATTGATCCGTTTGAATTTGTGCGGGTCCGGGAAGTGATGGACCAGGAGGCCCCCGTGATTCCCATGACGATGACCGTTGCCGAATTGTCCGACCGCATCGCCGGCGGCGACACGGTGCTTTCGCGGCGCCAGGGCACGCTGATCGTAAACGGGCAAAACCGGCTCGCCGGCATCATCACCCGCGGCGACATGCTCCGCGCGTTGCGACGGGAGCAGGCTTCGGACATGACCGTGATCGAGGCGGGCAGCCGGGATTTGATGGTGGCCTTTCCGGACGAACCGCTGCACCTCGCCTTGACCAAAATGCTGGATCGCGGCGTGGGACGCTTGCCAGTCGTGGAGCGTGACGATCCGTCGAAAATCGTTGGCTACCTCGGCCGCGCGGCAATCCTGTCCGCCCGGAAGAAAATTCATGAAGAAGAAACGATCCGCCAGCGCGGCTGGGTTTCCGGAACCAAGCCAACGGGCAAAACCTGTGCGACGTCGTGA
PROTEIN sequence
Length: 609
MQTDDISAAPTVSRAEELADFSTDRRVLLLSFMALIIGMVSALVAYILMWLIAAITNLAFYQRFSSASVVPQGNHLGYWVILIPVIGAVVIGLMARFGSEKIRGHGIPEALEAILLGRSFISLKVAILKPLSSAISIGTGGPFGAEGPIIMTGGAFGSIFAQLFHLSAAERKTLLVAGAAGGMAAIFDTPVAAVLLAVELLLFEWKPRSLIPVAVAAVVASVMRVPLLGSGPVFPTTPHAPVSGEILVIAAGVGLLVGFGAGLMTTLVYAIEDLFQKLPVHWMWWPAIGAVIVGVGGYFEPRVLGVGYGTIHSLLEGHIIGAAIIGLLIAKALVWTVALGSGTSGGVLAPLLIIGGSLGALAGTWIPVGDIGLWALIGMAAMMGGTMRAPLTAMVFAVELTRDFNLFPALLVGSMVAFGVMVLLMRRSILTEKLARRGHHIICEYSIDPFEFVRVREVMDQEAPVIPMTMTVAELSDRIAGGDTVLSRRQGTLIVNGQNRLAGIITRGDMLRALRREQASDMTVIEAGSRDLMVAFPDEPLHLALTKMLDRGVGRLPVVERDDPSKIVGYLGRAAILSARKKIHEEETIRQRGWVSGTKPTGKTCATS*