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berkeley_reactor_200306_planktonic_scaffold_226867_43

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(57966..58232)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNE7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 84.0
  • Bit_score: 96
  • Evalue 8.80e-18
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 84.0
  • Bit_score: 96
  • Evalue 1.20e-17
30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 88.0
  • Bit_score: 67
  • Evalue 2.10e-09

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 267
ATGCCGAATACGAAGTCAGCCGAACGCCGGATGCGGAACAGCAAGCGCAAGCAACTCCACAACAGCGCCGTCAAATCCCGCCTGCGCCGCATTGAAAAACAGTTCCGCGCCGCCGTGGTCGCCGGCAAGCCGGACGAAGCCGCCAAACTGCTTCCCGGCGTTCACTCCGCCTACGACAAGGCGGTCAAGGTCGGCACCGTCAAGCGCGCCACGGCCAACCGCAAAAAATCCCGGCTCGCCGTTTCGCTGAAGCCCGCCGCCAAATAA
PROTEIN sequence
Length: 89
MPNTKSAERRMRNSKRKQLHNSAVKSRLRRIEKQFRAAVVAGKPDEAAKLLPGVHSAYDKAVKVGTVKRATANRKKSRLAVSLKPAAK*