ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_207894_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(82..2772)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000371C194 similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 866.0
  • Bit_score: 573
  • Evalue 3.30e-160
Putative TPR repeat-containing protein {ECO:0000313|EMBL:ACX33953.1}; TaxID=672204 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote EC6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 889.0
  • Bit_score: 503
  • Evalue 5.80e-139
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 851.0
  • Bit_score: 357
  • Evalue 1.00e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured prokaryote EC6

Sequences

DNA sequence
Length: 2691
ATGAAAACTCGGTTGGCGGCGGTTTTGACCGTCCTTGCCTTGGCGGCGGCTTTCCCGGCCCATTCAGCGGAAGCCCTGGCCACGAGCCTCGTCCGCATTGTGGAATTACAAGGCACCGTGGACGTGCTGCCCGCCGGCACGCAAACCTGGTCCACCGCCACCAACCACCAGCCGCTGCGCGCGTTTGACCGGATTCGCACCGCCGCCAACAGCCGCGTGGCGCTGCGCTGGTCCGGCCAGAGCGTTGTGCCCTTTGGCGCCTCCACCGAACTGGAAGTCCTGCCGCCCGACGCCACGGATACCCAGGCGGGATTGCACCTGATTCGCGGCGTCGTTTCGTTTTTTCATCGCGACCAGCCCGGGCACATCCGCATCCTCACCCGCGGCGCGGTCGCCGGCGTGGAAGGCACCGAATTCGTCCTGGCCGTCAATGACACCGACCGCACCACGCTCTCCGTGGTGGATGGCAAGGTGAACCTCGGCAATGAACACGGTTCGCTGCTGCTGACCAACGGCCAGCAAGCCGTGGTGGATTTGGGCCAGGCGCCCCGGCGCACCGCCGGATTTATTGCCAACAATCTCCTGCAATGGTGTTTCTATTATCCCGCCGTGCTGGACCCGGATGAACTGCAATTGACGACGGACGAACAAAACGAGCTGGCGGCTTCACTGGCGGCTTATCGTTCGGGTGATTTGCAACGGGCGCTAACACTATTTCCGGCCGCCAACTCCGGTTCCGATGAAGAAAAAGTATATCACGCCGCCTTGTTGCTGTCGGTGGGAGACGTGGAACGGACCGAAGCCATTCTGGAATATCTGAACCAACAATCGGGACGAACCAGGCAACTGGCCGATGCGTTGCGGCAGTTGATTGCGGCGGTGAAATTGCAGCCAACCGTCGTGACCAACCAGCCCCAGCTGGCCTCGGAACTGCTGGCGGATTCGTATTTTCAACAATCGCGCGCCGTGCGGGAAGTTTCGTTGCAACGGGCGCTGGCCGATGCGCAGGCGGCGGCGGCGAAATCGCCGCAGTTCGGGTTTGCGTGGGAACGCGTGGCGGAACTGGAATTCAGCTTTGGCCGGACAAAGGACGCCTTGAAAGCCCTGGACAAGAGCCTGGCGCTGGCGCCGCGCAATGCGCAGGCACAGGCGCTGCGGGGGTTCATTCTCCTGGCGGAAAACGACACGCACAACGCGCGGCTGAGATTTGACCGGGCCCTGGCCGCCGATTCCGCGCTGGGCAACGCGTGGCTGGGCCGAGGCCTGCTGCGCATACGCACGCGGGATCTGGCCGGCGGCCGGGAAGACCTGCTCATTGCCGCCGCGCTGGAACCGCAACGGTCGGAACTGCGCAGCTACCTCGGCAAAGCCTACGCCTTCACCGGTGATGACAAACGCGCCACCAAGGAACTGAACATTGCGAAGCGGCTGGACCCGAACGACCCGACACCGTGGCTGTATTCGGCGTTGCAGAAGCAGTCAAACAACAAGATTAACGACGCGATTCGGGACTTGGAAAAATCACAGCAATTGAACAACAACCGGAGCGTGTATCGTTCGCAGTTGTTGCTGGACCAGGACCAGGCGGTGCGCGGGGCCAACCTGGCGAGCATTTATCAGGACGCGGGCATGACGGATGTGAGCATTCGTGAGGCGGACCGGGCGGTGAATTACGATTACGCGAATTATTCGGCGCACAATTTTCTGGCCAACAGTTACTTTGAGCAGTTCGATTCCTACCAAAACCACGTTCGAGCCGAACCAGTGGTGGCGAGCGAGTATCTGCTAGCCAACTTGCTGGCCCCGGCCAACGCCGGGATCTTTTCCGTTTCTATGGGCCAGCAGCAGCATTTCGTTCCGTTCATGCAAAATCATCTGGGGCTGGTTTCCAGCACGGAATATTTAAGCCGCGGCGCCTGGACGCAGTCGGCCCTGCAGTATGGCACGCTTGACAACTTTAGCTATGGCGTGTCGGGAAGTTATCATACCGACCCTGGCCAGTATCCGGACAATGATCTGGAAACCAAGTCGCTTGGCCTCCAGGTCAAGTTGGGATTGACGCCGCAGGACGATGTTTATGGTGAAGTGAGGGAAGGACGAAGGGATGGGGGAGATTTTTCGCAATATTATGACCCCTACGCGGGACAGTTGAATGACCGCTTCAATGAAAAGCAAAATCCGGATCTGACGCTGGGATATCACCATGAATGGGAGCCCGGCGTGCATAGCCTCGTGTTTGCGTCTTACTTGAAGGATGACTATTCACAAAACGGCACAGCGGAGGTGATTAATCCAGACTACGTTCCGGAATACGCGATTAATCCATTGGGATTGGTTTCGGTGTTAAGTGGGTTTTACATGAACGCGGCTTACCACAACACGCTATCCTTATACACGGTGGAAGCACAGCAAATCGTCGAACAGGACATTCACACGACTATCCTTGGCGGACGCTACCAATATGGCACGGCCGACACGCAAAATATCGAGACTCCTGCGGACGGTTTTCCTTTCCCCGCCTACTTTTCTGATCCTTCTGCAGACCAGGACTTTAATAACACGCTGAAACGCTTCAGTGTTTATGGTTATCACTATTGGCAGATTTTTGAGCCACTGCAATTGATAGGTGGTCTAAGCCGGAACGATGCAGTTGAGCGCATATTCTGGGTGTATTTTTGCGCTCATGCCTGA
PROTEIN sequence
Length: 897
MKTRLAAVLTVLALAAAFPAHSAEALATSLVRIVELQGTVDVLPAGTQTWSTATNHQPLRAFDRIRTAANSRVALRWSGQSVVPFGASTELEVLPPDATDTQAGLHLIRGVVSFFHRDQPGHIRILTRGAVAGVEGTEFVLAVNDTDRTTLSVVDGKVNLGNEHGSLLLTNGQQAVVDLGQAPRRTAGFIANNLLQWCFYYPAVLDPDELQLTTDEQNELAASLAAYRSGDLQRALTLFPAANSGSDEEKVYHAALLLSVGDVERTEAILEYLNQQSGRTRQLADALRQLIAAVKLQPTVVTNQPQLASELLADSYFQQSRAVREVSLQRALADAQAAAAKSPQFGFAWERVAELEFSFGRTKDALKALDKSLALAPRNAQAQALRGFILLAENDTHNARLRFDRALAADSALGNAWLGRGLLRIRTRDLAGGREDLLIAAALEPQRSELRSYLGKAYAFTGDDKRATKELNIAKRLDPNDPTPWLYSALQKQSNNKINDAIRDLEKSQQLNNNRSVYRSQLLLDQDQAVRGANLASIYQDAGMTDVSIREADRAVNYDYANYSAHNFLANSYFEQFDSYQNHVRAEPVVASEYLLANLLAPANAGIFSVSMGQQQHFVPFMQNHLGLVSSTEYLSRGAWTQSALQYGTLDNFSYGVSGSYHTDPGQYPDNDLETKSLGLQVKLGLTPQDDVYGEVREGRRDGGDFSQYYDPYAGQLNDRFNEKQNPDLTLGYHHEWEPGVHSLVFASYLKDDYSQNGTAEVINPDYVPEYAINPLGLVSVLSGFYMNAAYHNTLSLYTVEAQQIVEQDIHTTILGGRYQYGTADTQNIETPADGFPFPAYFSDPSADQDFNNTLKRFSVYGYHYWQIFEPLQLIGGLSRNDAVERIFWVYFCAHA*