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berkeley_reactor_200306_planktonic_scaffold_207894_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20941..22371

Top 3 Functional Annotations

Value Algorithm Source
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EEF57089.1}; EC=2.4.2.4 {ECO:0000313|EMBL:EEF57089.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 435.0
  • Bit_score: 566
  • Evalue 2.30e-158
thymidine phosphorylase (EC:2.4.2.4) similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 433.0
  • Bit_score: 360
  • Evalue 6.50e-97
Pyrimidine-nucleoside phosphorylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSV2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 435.0
  • Bit_score: 566
  • Evalue 1.60e-158

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGTGGGCAGCGGCGCACGTCGGTGCCGCAGCACCGACGCCACTAAATTCGGGATGCCGCCGGTGGGAATGCTGCCGGATTTGTATTGCTTTCATCGGCACCTTTGCCAGCTTTTGGCCGTGAGTTTTTTACCGCTGATCGAGGCCAAACGCGAAGGCCAAGTTCTCACGCCGGACGCGATTCATCAATTCATCCGTGACTTTACCGACGGCACGATTCCCGATTATCAAATGGCCGCGATGCTCATGGCCATCTATTTTCGCGGGCTGACCGAATCGGAAACCACCGCGCTCACGCTGGCGATGCGGGATTCCGGCGACGTGCTGCAATTCCCCAGGGACACGCGTCCACTGGTGGACAAACATTCCACGGGCGGCATTGGCGACAAGGTTTCGCTGCCGCTGGCGCCGTTGCTGGCCTGCCTGGACTTTCGCGTGCCGATGATTTCCGGCCGCGGTCTGGGCATTACCGGCGGCACGCTGGACAAGCTGGATTCCATTCCCGGTTTCAAAACCCTTTTGCCGGCGGGAAAAATTGTCCGACAAGTCCAGGAAGTTGGCTGCGTGATCTGCGGACAAACCGAGCGCATGGTGCCGGCCGACAAAAAGATTTATGCCTTGCGCGATGCCAGCGGCACCGTCCCGAGCATTCCGCTCATCACGGCTTCCATTCTTTCCAAGAAACTCGCCGAAAATCTGGACGCGCTCATTCTCGACGTAAAATTCGGCAGCGCCGCCTTCATGCAAACCAGGGTGGAAGCGCGCCGGCTGGCCCGGGCGATGGTGTCGCTGGGCAATCAATGCGGCGTGAACACCCGCGCCATCCTCACCGACATGCACACGCCGCTGGGTCACGCCGCCGGCAACTGGCTGGAAGTGAAGGAAAGTATCGAATGTCTTGACGGCAAAGGCCCGGAAGATTTGCGTGAACTCGTCATTGATTGCGCCGCGCATCTGCTGGTGCAAACCCGCAGGAGCAAAACCGTGAAGGCGGCCGGAAAGCAGGCGCAACACTGTCTTGACTCAGGCAAACCGCGCGCCAAGTGGGACGAGATGCTGGTGGCGCAGGGTGCCAATCTGAAGGCGTTTGAGCGTAAGCTGGCCAAAGATTTTACGGCGAAAGCAATCGTTCAGGTGACCTCCCCAAAAGCCGGCTACGTTGCCCAATGCGATGCGCGCATCATCGGTGAAGTCATCCGCGATTTGGGCGGTGGCCGGCTGACAAAGGAATCGGCCATTGACTACGATGCCGGCCTGGACCAAATCGTGAAGCCGGGTGAGCAGGTGGCCAAGGACGGCATTTTGTGCCGGGTGCATGCCGCCACCCGGAGGCACGCCGATTCTGCGATACTGCGCTTGAAAAAGGCGTTTAAACTTTCCGGCAAGCGTCCGGCAAAACGGCCGTTGGTGATCGAAACGGTTTCCGGTTAG
PROTEIN sequence
Length: 477
MVGSGARRCRSTDATKFGMPPVGMLPDLYCFHRHLCQLLAVSFLPLIEAKREGQVLTPDAIHQFIRDFTDGTIPDYQMAAMLMAIYFRGLTESETTALTLAMRDSGDVLQFPRDTRPLVDKHSTGGIGDKVSLPLAPLLACLDFRVPMISGRGLGITGGTLDKLDSIPGFKTLLPAGKIVRQVQEVGCVICGQTERMVPADKKIYALRDASGTVPSIPLITASILSKKLAENLDALILDVKFGSAAFMQTRVEARRLARAMVSLGNQCGVNTRAILTDMHTPLGHAAGNWLEVKESIECLDGKGPEDLRELVIDCAAHLLVQTRRSKTVKAAGKQAQHCLDSGKPRAKWDEMLVAQGANLKAFERKLAKDFTAKAIVQVTSPKAGYVAQCDARIIGEVIRDLGGGRLTKESAIDYDAGLDQIVKPGEQVAKDGILCRVHAATRRHADSAILRLKKAFKLSGKRPAKRPLVIETVSG*