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berkeley_reactor_200306_planktonic_scaffold_207894_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(22394..23098)

Top 3 Functional Annotations

Value Algorithm Source
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 233.0
  • Bit_score: 360
  • Evalue 9.30e-97
Orotidine 5'-phosphate decarboxylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSV1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 233.0
  • Bit_score: 360
  • Evalue 6.60e-97
orotidine 5'-phosphate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 234.0
  • Bit_score: 229
  • Evalue 6.50e-58

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 705
ATGAAAAATCCCATCATCGCCGCGCTCGACGTTCCCTCGGCGGAACCGGCCCTGAAACTGGCGGAACAAATCGCGCCGGCCGTGGGCGCGTTCAAGATCGGCAAGGAACTGTTCGTGGCCGCCGGCCCCGACATCGTCAAGCGCATCCGCGCCACCGGCGCCAGCGTGTTTCTGGATTTGAAGTTTCACGACATTCCCAACACCGTCGCCAGGGCCGTGGCGTCCGCCACGCGGCTTGACGTGCAGATGCTCACCATCCACACCAGCGGCGGCGGCGAAATGATGCGCGCCGCGGAAAAATCCGCGCAGGACACCGCGAGATCGCTGGGCCGGCCCGCGCCGCTGGTTCTTGGCGTCACCGTGCTGACCAGCATGGACAGCAACAGCCTGTCGGAAATCGGCTGCGAAGCCAATGTCGGCCAGCAGGTCGCCCGCCTGGCGGCACTGGCGGTGAAGTCCGGTTTGCGCGGCCTGGTTTGTTCGCCCCTGGAAATTGCCGAACTCCGCCGGCTCCTGCCCGCGGAAATCCAACTGGTCACACCCGGCATCCGCACCGGCGCCGAAAAAGCCGACGACCAAAAACGCACGCTCACGCCCCGGGAAGCGATTCAAGCCGGCGCCAGTTGGCTGGTGGTCGGCCGCCCGATTTATGCGGCGGAAAATCCGCGCGCCGCCGCCGAAAAAATTCTGGAATCCCTCCACTGA
PROTEIN sequence
Length: 235
MKNPIIAALDVPSAEPALKLAEQIAPAVGAFKIGKELFVAAGPDIVKRIRATGASVFLDLKFHDIPNTVARAVASATRLDVQMLTIHTSGGGEMMRAAEKSAQDTARSLGRPAPLVLGVTVLTSMDSNSLSEIGCEANVGQQVARLAALAVKSGLRGLVCSPLEIAELRRLLPAEIQLVTPGIRTGAEKADDQKRTLTPREAIQAGASWLVVGRPIYAAENPRAAAEKILESLH*