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berkeley_reactor_200306_planktonic_scaffold_220416_2

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(576..1958)

Top 3 Functional Annotations

Value Algorithm Source
Alpha-L-fucosidase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GSD3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 432.0
  • Bit_score: 409
  • Evalue 4.20e-111
Alpha-L-fucosidase {ECO:0000313|EMBL:GAF02174.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 417.0
  • Bit_score: 466
  • Evalue 2.40e-128
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 349.0
  • Bit_score: 362
  • Evalue 1.30e-97

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Taxonomy

Saccharicrinis fermentans → Saccharicrinis → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1383
ATGACCGCAATATCCTTGAAACGCCCGCTGCTGGCGGTTTTAATCGCGGCCTTCGTTGGCGCCGGCTTCACCAGTTTCGCGGACCAAAGCGTCGCGGCGCCGCGGCACGATGCCAGTTCTCCGCCACAAACCGATGCCAGCCGGCGGATGGCGTGGTGGACCGCCGCGCGTTTCGGCCTGTTCATTCACTGGGGCCTGTATTCACAATGGGGCTGCCATTACCCGGGAACCAATGGAACCCTTATTGATGGCGGCAGTGCGCACATGATGCAGCGGTTGCAGATTCCCCTGGCGCAATACGCGAAAATTGCCGGTGTGTTTGATCCGACCAACTTCGATGCGGCGGCGTGGGTGCGTGTGGCCCAGGCGGCTGGCATGAAATACATGATCTTCACCGCCAAGCATCACGACGGGTTCGCCATGTTCGACAGCCAGTGCAACGATTACAACGTTGTCGCCCGCACGCCGTGGCATCGCGATCCGGTGAAGGAGCTGGCCGCGGCCTGTCAGAAGGCGGGCCTCAAATTTGGCGTCTATTACTCGCTGGGCCGGGACTGGGCGGACCCGGATGTGCCGACCCGGAATGGTTACCGCAGCAACACTTGGGATTATCCCGATGAAACGAACAAGGTGTTCGCCCGCTATTTCCAGCGCAAGGTCGTGCCGCAAGTCACCGAGCTGCTCACGCATTACGGCCCCATCGCCGTGCTGTGGTTTGACACGCCGGAGCGGATTTCCCCGGACGAAAGCCGGCAACTGGTGGCCCTGGTTCACAAACTTCAGCCCGAGTGCATCATCAATTCCCGCGTGGGGCACGGCCTGGGAGATTACGGCGTCCAGGAACAGAAAATTCCGGGCGGCGATCCCAAGCCGTGGGAGACCTGCATGACGCTCAATCATCATTGGGCCTATTTCCTGGGCGATGACAATTGGAAGACGCCCGCCACGGTCATTCGCAACTTGGTGGATATTGCCAGCAAAGGCGGCAACTATCTGCTCGACGTGGGACCGACCGGCACGGGTGTGATCCAGCCGGCGGCCATCGCGATTTTGCAACAAGCGGGTTCCTGGATGAAGGTCAATGGCGAATCCATTTATGGCACGACCGCCAGTCCGCTGACCGCGCAGCCGGAGTGGGGACGCGTGACCCGGAAAGGCAAAACGCTTTACCTGCATGTCTTCAACTGGCCGGCCAACGGAACGCTGCTGGTTGACGGAACGACCGCGCCGCTGCTGCAAACCAATCGCCCCCCAGACGCATACCTGCTCGCCGCGCCTGGCCGGAAGCTGAAAGCCGGATTCACGACCGGTCATGACTTCACGATTCAATTGCCCGCCAAACCGCTGGACCCGGTGGATACGGTGATTGTTTTAAAATTTTAA
PROTEIN sequence
Length: 461
MTAISLKRPLLAVLIAAFVGAGFTSFADQSVAAPRHDASSPPQTDASRRMAWWTAARFGLFIHWGLYSQWGCHYPGTNGTLIDGGSAHMMQRLQIPLAQYAKIAGVFDPTNFDAAAWVRVAQAAGMKYMIFTAKHHDGFAMFDSQCNDYNVVARTPWHRDPVKELAAACQKAGLKFGVYYSLGRDWADPDVPTRNGYRSNTWDYPDETNKVFARYFQRKVVPQVTELLTHYGPIAVLWFDTPERISPDESRQLVALVHKLQPECIINSRVGHGLGDYGVQEQKIPGGDPKPWETCMTLNHHWAYFLGDDNWKTPATVIRNLVDIASKGGNYLLDVGPTGTGVIQPAAIAILQQAGSWMKVNGESIYGTTASPLTAQPEWGRVTRKGKTLYLHVFNWPANGTLLVDGTTAPLLQTNRPPDAYLLAAPGRKLKAGFTTGHDFTIQLPAKPLDPVDTVIVLKF*