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berkeley_reactor_200306_planktonic_scaffold_220752_68

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(85721..86731)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBW3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 334.0
  • Bit_score: 318
  • Evalue 4.10e-84
Type II secretion system protein {ECO:0000313|EMBL:EEF62431.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 334.0
  • Bit_score: 318
  • Evalue 5.80e-84
type II secretory pathway protein similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 332.0
  • Bit_score: 131
  • Evalue 3.50e-28

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1011
ATGGGTCTGATCCTTTCGCCCGGCCAACTGGCACATCGCGCGGAGCTTTATCATCAGTTGGCGCAGCTCGTTGCCGCCGGCATCAGCCTGACGCAGGCGTTGGAACGGTTGCAGCGAAATCCTCCCAGTCGTTCGTTTCGTGAACCGCTGCGCCGCTTGGTGGAAAACATCAACCAGGGCGGCACTTTTGCCGATTCCTTGCGGGCGTCGAGCGGCTGGCTTCCGGAACTGGATGTGGCGCTCTTTGCAGCCGGAGAACAAAGCGGGCGTCTCGACATTTGCTTCCGGGTGCTGGCCGAATATTACCACGAGCGGGCCCGGATGCTAAAACAGGCGATCTCCCAGCTCTTCTATCCGGTGTGCCTGATTCACGCCGTAGTCTTTGTTTTCCTGATCGTCGTGCCGTTTGCGGGATCAAGGTTCAGCGCCAGTCTGCCGGTGTTGTTTCTCAATGCGGCATTGGTTCTGATGCCATTTTATGTTGGCACCGCCCTTCTGATTTACATCCTTCAAGCGCGCCACGGAGAATCGTGGCGGGCGCTTGTGGAATCATGTTTGCGTTGTGTTCCAGTGCTGGGAACGGCCCGGTATTACCTGGCGCTGTCCCGCTTGGCGCTCACCCTCGAGGCAATGCTCAATGCCGGCGTCAATGTCATCCAGGCATGGGAACTGGCTGCAAATGCCTGCGGCTCGCCCGCTTTGCGAAGGGCTGTCATTGCCTGGAAACCGCAGGTGGAAGCGGGAGAAACGCCTGCAACCGTCGTGACCAATTGCTCGAAGTTTCCCGAATTGTTCGCCGACTTTTACCGGAGCGGTGAACTCAGCGGCAGTCTGGATGATTCGCTCCAACATCTGCACCGTTATTATCGCGACGAAGGCAACCGCAAGCTCCAGAATTTTGCCGAATGGACGCCGCGAATCCTTTACGCGCTCGTCGCCCTCATCATCGCCTACAAAATCATTCAATTTTACGGCGGCTACTTCAACCAGATCTCGCACCTGGTGAACTGA
PROTEIN sequence
Length: 337
MGLILSPGQLAHRAELYHQLAQLVAAGISLTQALERLQRNPPSRSFREPLRRLVENINQGGTFADSLRASSGWLPELDVALFAAGEQSGRLDICFRVLAEYYHERARMLKQAISQLFYPVCLIHAVVFVFLIVVPFAGSRFSASLPVLFLNAALVLMPFYVGTALLIYILQARHGESWRALVESCLRCVPVLGTARYYLALSRLALTLEAMLNAGVNVIQAWELAANACGSPALRRAVIAWKPQVEAGETPATVVTNCSKFPELFADFYRSGELSGSLDDSLQHLHRYYRDEGNRKLQNFAEWTPRILYALVALIIAYKIIQFYGGYFNQISHLVN*