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berkeley_reactor_200306_planktonic_scaffold_220752_71

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(87679..88011)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 123.0
  • Bit_score: 120
  • Evalue 5.40e-25
RNA-binding proteins (RRM domain) similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 104.0
  • Bit_score: 109
  • Evalue 6.00e-22
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 99.0
  • Bit_score: 123
  • Evalue 1.20e-25

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Taxonomy

R_OD1_Yanofskybacteria_49_25 → Yanofskybacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGAGCCAAGCCAGATTATTCGTGGGCAACCTGTCCTACCAGACGGGTGAAAACGACCTCCAGGATTACTTCGCCCAAGCCGGCGCAGTGACATCCGTGAACCTCATGCTCGACAAAATGAGCGGCCGCTCGCGCGGTTTTGCCTTCGTCGAATTCGCCACGCCCGAAGAAGCCCAGAAAGCCATCGAGCAATTCCACGACAAGGATTTTCAGGGCCGCAAGATTACCGTCAATGTCGCCCGGCCGCGCGAGGAACGCGCACCCCGCAGCGGCGGTTTCGGAGGCGAACGCCGCGAACGCTTTGACCGCGGTGAACGTCGCGAGCGTTATTGA
PROTEIN sequence
Length: 111
MSQARLFVGNLSYQTGENDLQDYFAQAGAVTSVNLMLDKMSGRSRGFAFVEFATPEEAQKAIEQFHDKDFQGRKITVNVARPREERAPRSGGFGGERRERFDRGERRERY*