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berkeley_reactor_200306_planktonic_scaffold_220752_123

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 145667..147100

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB32_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 484.0
  • Bit_score: 533
  • Evalue 2.00e-148
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EEF62717.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 484.0
  • Bit_score: 533
  • Evalue 2.80e-148
multidrug transporter similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 474.0
  • Bit_score: 529
  • Evalue 8.10e-148

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAATAAATCTGTTTACCTCGCCGCGCTGGCTGCCGTCACTTTGACCGGCTGCACGCTCGCGCCCAAATATGAACGTCCCGCCGCGCCGGTGGCGCAAAACTGGCCGGCCGACGCATCCGCCGGTCAAGCCGGTGCGGGAACCAACGCCGTGGCCGACATCGGCTGGCGGGAGTTTTTCCAGGACGCACGCTTGCAGGCGCTCATCGGCCTGGCTCTGACCAACAACCGGGACCTGCGCGTCGCCACGCTCAACGTGGAAAAATCCCACGCCCAATACCGCATCGAACGCGCCGCGTTGCTGCCGCAAATTGACGCCAACGGCAGTTTCCTGCGCCAGCGCCAGCCGGGCGGCTTGTTCGGCAACAGCGGACCGGTCACTTACAGCCAATACGACGTCAACCTCGGCACGGCCGCCTACGAACTGGATCTTTTCGGCCGCGTCCGCAGCCTGAAGGCGGCGGCCTTGGAAAATTATTTCGCCACGGAAGCCGCCCGCAAAAGCGTCGAGATCGCCCTGGTGGCCGGGGTGGCCAATCAATATCTCGTCGAGCGGGAACTGACCGAACAATTGAAGATGACGCAGGACACGCTGACGGCGGTGCAGGATGCCTACAATCTCATCAAGGCCAGTTATGACGCCGGCAATGCGTCGGAACTGGATTTGCGCACCGCCGAAGCCCAGGTGGCCACCGCCAAGGGCGACGCCGCGTTTTATGAACAGCAGCGCGACCAGGCGCGGCACGCGCTGGTGCTGCTCGTCGGCGAACCGCTGCCGGATGATTTGCCGCCGCCGAAACCGCTCAGCGAGCAGCATTTGCTCACCCGCCTGCCGCCGGGTTTGCCGTCGGATTTGTTGCAGCGCCGGCCGGACATCCTCGCCGCCGAACACGTTTTGAAAGCCGCCAACGCCAACATCGGGGCCGCGCGCGCCGCGTTTTTCCCGTCCATCAAAATCACCGCCAATGCCGGCACGTCGAGCGCGGACCTGGCCGGGTTGTTCGCCGATGGTTCCGGCGCGTGGCTGTTCAATCCGCAAATCACGCTGCCGATTTTCACGGGCGGCCAGAACAAGGCGAATTTGGACGTTGCGAATCTGAGTAAGCGCATTGAGGTGGCCAATTACGAAAAAGCGATTCAAACCGCCTTTCGCGAAGTGGCCGACGCGTTGACCGCCAAAAAATTCCTGGATGAACGGCTGGCGGACAACGAGGCGCTGGCCCGGGCCGAGCAGCGGCGCTACGACCTCGCGGACGCCCGTTACCAAAACGGCGTGGACAGCTACCTGTCCGTGCTGACCGCGCAGCAGGATCTTTACAGCGCCCAGCGCAGTTTGATCGCCACCGAGTTTGGCCGTTTGTCCAACCTCGTCAGCTTGTATCAGGCGCTGGGCGGCGGCTGGCGGGAGAACTCGCCGTCCGCGAACGGCAATTGA
PROTEIN sequence
Length: 478
MNKSVYLAALAAVTLTGCTLAPKYERPAAPVAQNWPADASAGQAGAGTNAVADIGWREFFQDARLQALIGLALTNNRDLRVATLNVEKSHAQYRIERAALLPQIDANGSFLRQRQPGGLFGNSGPVTYSQYDVNLGTAAYELDLFGRVRSLKAAALENYFATEAARKSVEIALVAGVANQYLVERELTEQLKMTQDTLTAVQDAYNLIKASYDAGNASELDLRTAEAQVATAKGDAAFYEQQRDQARHALVLLVGEPLPDDLPPPKPLSEQHLLTRLPPGLPSDLLQRRPDILAAEHVLKAANANIGAARAAFFPSIKITANAGTSSADLAGLFADGSGAWLFNPQITLPIFTGGQNKANLDVANLSKRIEVANYEKAIQTAFREVADALTAKKFLDERLADNEALARAEQRRYDLADARYQNGVDSYLSVLTAQQDLYSAQRSLIATEFGRLSNLVSLYQALGGGWRENSPSANGN*