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berkeley_reactor_200306_planktonic_scaffold_220752_122

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 142507..145659

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB33_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 1032.0
  • Bit_score: 1531
  • Evalue 0.0
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:EEF62718.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 1032.0
  • Bit_score: 1531
  • Evalue 0.0
acrB; cation/multidrug efflux pump AcrB similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 1046.0
  • Bit_score: 1431
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3153
ATGCCACGATTTTTCATTGATCGTCCGATTTTCGCCTGGGTCATCTCGATCCTGATCATGCTGGCGGGCGCGCTGTCGCTCACCAAGCTGCCGGTCGCGGAGTATCCGAGCATCGCGCCGCCGTCGGTGGCCATCACGGCCAATTATCCCGGCGCCTCCGCCGAGACGCTGCAAAAAACGGTGACCTCCGTGATCGAGCAGCAGCTCAACGGCATTGACCATCTGCTTTACATTTCGTCGCAGAGCCAGTCCTCCGGCCAGGCGCAAATCACGGTTTATTTCGACGCCGGCACCGATCCGGACATCGCCCAGGTGCAGGTGCAGAACAAATTGCAACTGGCCATGCCCAACCTTCCGGCGTCCGTGCAGCAGCAGGGCGTGACGGTGGCCAAGGCCACGCGCAACTTCCTGATGTTTTTCACGCTGTCCTCGAAATCCGGCAAGATTGATGAGGTTACGCTGGGCAATTACATCGCGTCCAAGGTGCTGGACCCGATCCGCCGCGTGGACGGCGTGGGCGAGGCGGACCTGTTCGGCACGGAGTTCGCCATGCGCATCTGGCTGGACCCGGCGAAGCTGGACAGCTACGGGCTGACCGCCGGCGATGTGATTGACGCCATCAAGGCGCAGAATGTCCAGGTGCCCGCCGGCCAGTTGGGCGCGCGTCCGGCGCTGGACGGCCAAGAATTGAACGTGACGCTGCAAGGGCAGAGCACGCTGGAAACGCCCGATCAGTTCGGCAACATCCTGCTGCGCGTGAATCCGGACGGTTCGCGGGTGCGCCTGCGCGATGTCGCCCGCGTGGCGCTGGGCGGCCAGAATTACACGGTGCAAGCCCGGGTGAACGGCGTGCCGGCGGCGGCGGTGGGCATCAAGCTCTCGCCCACGGCCAACGCGCTGGCCACGGCGGACGCGGTGCGCGCGAAGGTGAAGGAGCTTTCCAAATTTTTCCCGCCCGGTGTGCAGGCGACCTTTCCTTACGACAGCTCGGCCTTCGTGCGGATTTCCATTCATGAAGTGGTTTACACCCTGCTGGAAGCGTTTGTGCTGGTGTTTTTGGTGATCTACCTGTTTCTGCAAAACCTACGGGCGACATTCATTCCCACCATCGTGGTGCCGGTGGCGTTGCTGGGCACGCTCACCGTCATGGACCTGGCCGGGTATTCGGTCAACGTGCTGACGATGTTTGGCATGGTGCTGGCCATCGGGTTGCTGGTGGACGACGCCATCGTGGTGGTGGAAAACGTCGAGCGCATCATGAGCGAGGAAGGATTGTCGCCGCGCGACGCCACCCGCAAATCCATGGGACAGATCACCGGCGCGCTGATCGGCATCGCGCTGGTGCTGACGGCGGTGTTCATTCCGATGGCGCTGTTCGGCGGCTCGGTCGGCGCGATTTACCGGCAGTTTTCGCTGGCGATGGTTTCCTCGATGTTGTTCTCGATTTTCCTCGCGATGTCGTTTACGCCGGCGCTCTGCGCCACCATGCTCAAGCCGGTTGAGAAGGGGCATCACATTGAGAAGAAAGGGTTGTTCGGCTGGTTCAACCGCGGTTACGCCGCGAGCGCGAAGAAATACCAGACCTGGGTGGAACGCATGCTGGCCCGGGCGCCGCGCTATCTGGTGGCGTATGTCGCCATCCTCGTGGCGATGGGCTGGCTGTATTACCGGCTGCCGTCCTCGTTTTTGCCGACGGAAGACCAGGGCTATTTCATCACCAGCATCCAGTTGCCCGTGGGCGCCACCCAGCAGCGGACGCTCGAAGTGCTCAAGAAACTGGAGCATTATTACCTGAGCCAGCCCGAGGTGGAGGACGTGATTGATGTGGCCGGCTTCAGCTTCAGCGGCCAGGGCCAGAACGCGGCCATCGCCTTCGTGCATTTGAAGGACTGGAGTGAACGCCACGGCGCCAAACATCATGCGGAGGGCATCATCGCCCGCGCCTTTGGCGCCCTGTCCGCCATCAAGGACGCCATCATTTACCCGATCAATCCGCCGCCGATCCCCGAGCTGGGAACCGCCTCCGGGTTCGATTTTGAACTGGAGGATCGCGGCGGCCTGGGCCACGACCAACTGATCGCCGCCCGCAAGGAACTGCTCGCGATGGCCGCCACCAACCAATACGTGGCCAACGTGCGCGCGCAGGGCATGGAGGACAACGCGGAATTGAAAATCTCGGTGGACCGCGACAAGGCCAGCGCGCTCGGCGTTTCGCTGGGCGACATCAACACCGCCTTGTCCGCGAATTTCGGCTCCGATTACGTGAACAATTTCGTGGACGGCAACCGCGTGCAGCAGGTCATCGTGCAGCTTGACGCGCCGTATCGCATGACGCCCGACGACATCGGCAAGGTGTTCGTGCGCACGAAGAGCGGTTCCATGGCGCCGCTCTCGGCCTTCACCTCGCTCAAGTGGACCTACGGTTCGCCGCGGCTCGAACATTACAACGGTTTTCCGTCGCAGGAAATCATCGGCACCGCCGCGCCCGGCAAAAGTTCCGGCCAGGCGATGCAGGCCATGGAGGACATGGCCGGCAAACTGCCCGCCGGCATCGGCTACGAATGGACGGGCCAATCCTACGAGGAACGGCTCTCCGGTTCGCAGGCGCCGGCGCTTTACTCCATTTCCTTGCTGGTGGTGTTCCTGTGTCTGGCGGCCTTGTATGAAAGCTGGGCCATTCCGTTTTCCGTCATTCTGGCGGTGCCGCTCGGCGTTCTCGGCGCCTTGCTGGCCGCCACCTTCCGCGACCTGCCGAACGACGTGTTTTTCAAGGTGGGCCTGATCACGACCATCGGCCTGGCCACGAAAAACGCCATTCTGATCGTGCAATTTGCCGTGAATCTCCAGGAGGAAGGCAAGGGGTTGATCGAAGCCACCCTGGAAGCGGTGCATATCCGCCTGCGCCCGATTTTGATGACCTCGTTTGCGTTCATCCTCGGCGTGGTGCCGCTGGCGGTGAGCACCGGCGCGGGTTCCGGCGGGCAGAACGCCATTGGCACCGGCGTGATCGGCGGCATGGTGGGCGCGGTCCTGCTGGGAGTCTTTTTTGTGCCCGTCTTCTTCGTGGTGGTGCGCCGGATTTTCAAGGCCAAAACGGCCCGGCACAAAAAACATTACGATTCCGAGATCACCGACCAACCCGACAGCCCCTGA
PROTEIN sequence
Length: 1051
MPRFFIDRPIFAWVISILIMLAGALSLTKLPVAEYPSIAPPSVAITANYPGASAETLQKTVTSVIEQQLNGIDHLLYISSQSQSSGQAQITVYFDAGTDPDIAQVQVQNKLQLAMPNLPASVQQQGVTVAKATRNFLMFFTLSSKSGKIDEVTLGNYIASKVLDPIRRVDGVGEADLFGTEFAMRIWLDPAKLDSYGLTAGDVIDAIKAQNVQVPAGQLGARPALDGQELNVTLQGQSTLETPDQFGNILLRVNPDGSRVRLRDVARVALGGQNYTVQARVNGVPAAAVGIKLSPTANALATADAVRAKVKELSKFFPPGVQATFPYDSSAFVRISIHEVVYTLLEAFVLVFLVIYLFLQNLRATFIPTIVVPVALLGTLTVMDLAGYSVNVLTMFGMVLAIGLLVDDAIVVVENVERIMSEEGLSPRDATRKSMGQITGALIGIALVLTAVFIPMALFGGSVGAIYRQFSLAMVSSMLFSIFLAMSFTPALCATMLKPVEKGHHIEKKGLFGWFNRGYAASAKKYQTWVERMLARAPRYLVAYVAILVAMGWLYYRLPSSFLPTEDQGYFITSIQLPVGATQQRTLEVLKKLEHYYLSQPEVEDVIDVAGFSFSGQGQNAAIAFVHLKDWSERHGAKHHAEGIIARAFGALSAIKDAIIYPINPPPIPELGTASGFDFELEDRGGLGHDQLIAARKELLAMAATNQYVANVRAQGMEDNAELKISVDRDKASALGVSLGDINTALSANFGSDYVNNFVDGNRVQQVIVQLDAPYRMTPDDIGKVFVRTKSGSMAPLSAFTSLKWTYGSPRLEHYNGFPSQEIIGTAAPGKSSGQAMQAMEDMAGKLPAGIGYEWTGQSYEERLSGSQAPALYSISLLVVFLCLAALYESWAIPFSVILAVPLGVLGALLAATFRDLPNDVFFKVGLITTIGLATKNAILIVQFAVNLQEEGKGLIEATLEAVHIRLRPILMTSFAFILGVVPLAVSTGAGSGGQNAIGTGVIGGMVGAVLLGVFFVPVFFVVVRRIFKAKTARHKKHYDSEITDQPDSP*