ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_208745_35

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(38095..38898)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZV3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 269.0
  • Bit_score: 226
  • Evalue 2.90e-56
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 269.0
  • Bit_score: 226
  • Evalue 8.20e-57
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CCW36632.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 269.0
  • Bit_score: 226
  • Evalue 4.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthonomonas calidirosea → Chthonomonas → Chthonomonadales → Chthonomonadetes → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 804
ATGCGCCAGCAACTCAAGCTGCCCAAGCAACTGGACGGGAATTTCTGGCATTACCGCCAGGGTGGGCGCAATGCCATGCACCGGCATGCCGAACTGGAGCTCAATCTCATCACCTCCGGCAGCGGGCTTTACCTGCTGGAAAATCGCAAATACAAAATCCGGCGCGGCGACCTGCTCTGGCTCTTTCCGGCGCAGGAACACGTCCTGGTCGAGCAAACACCGGATTTTGAAATGTGGATCGGCGTTTTCAAACCCCGAACCGTGCGCCGGGTCGCCACCGACAAAAGCACGAAGCTTCTCCGCCAGCCCAATCCGCCGGGCGAGTATTGCCGGCGCCTCGGTCAGCCCGCGCTGGCGTGGCTGGAAAAATTGTTCACCCAGATCGCCGGTGCCTCCGCCCAGCCTGGATTGTTCAATCAGGGAATTGCGTATGCCCTGCTGACCGCGTGGGATCATTTCACGCATGCCACCGAAATCCCCATTCAGGATGTTCATCCCGCCGTGGAACGCGCCGCGCGCCATCTTCAAAATCGGGACAACACGATCAGCCTGGAGGCGCTCGCCCGGCACGCCGGCCTGAGCGCGCCGCGTTTAAGCCGGTTGTTCAAGCAGCAGACCGGCGTGGCCCTGGTGGATTTTCGCAACCGTCAACGGATTGAGAAATTTCTCGCGATCTACAACACGGGCCAGCGTTTGACCATGCTCGATGCCGCGCTGGCCGCGGGTTTTGGCAGTTATCCGCAATTCCACCGGGTGTTCAAGCGGGTGCTGGGCTGCTCGCCGGTCGAGCATCAAAAAAGGTAG
PROTEIN sequence
Length: 268
MRQQLKLPKQLDGNFWHYRQGGRNAMHRHAELELNLITSGSGLYLLENRKYKIRRGDLLWLFPAQEHVLVEQTPDFEMWIGVFKPRTVRRVATDKSTKLLRQPNPPGEYCRRLGQPALAWLEKLFTQIAGASAQPGLFNQGIAYALLTAWDHFTHATEIPIQDVHPAVERAARHLQNRDNTISLEALARHAGLSAPRLSRLFKQQTGVALVDFRNRQRIEKFLAIYNTGQRLTMLDAALAAGFGSYPQFHRVFKRVLGCSPVEHQKR*