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berkeley_reactor_200306_planktonic_scaffold_208745_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 66819..67874

Top 3 Functional Annotations

Value Algorithm Source
3'-5' exonuclease n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPC9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 351.0
  • Bit_score: 424
  • Evalue 9.60e-116
3'-5' exonuclease {ECO:0000313|EMBL:EEF58269.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 351.0
  • Bit_score: 424
  • Evalue 1.30e-115
3'-5' exonuclease similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 355.0
  • Bit_score: 236
  • Evalue 1.00e-59

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1056
GTGATTGACACCGACGAAAAGCTGGCCCAATTCCTGCCGCTGATCCGCTCCGCCGCGTGGCTCGCCATAGACACCGAGGCGGACAGTTTGCATGCTTATCCTGAAAAAGTTTGTCTCATCCAAATCAGCACCGCCGACGGCGACCGGCTCGTGGATCCGCTGGCCAAAATGGACATCAATCCGCTCCTGGACGCGCTCGCCGGGCGCGAACTGATCTTTCACGCGGCGGATTACGACTTGCGCCTGCTGCGCAAACATCACGACTTCACCCCCACGGAAATTTTCGACACCATGCTGGCGGCGCGCCTGCTGGGCGAACGCCAGTTTGGCCTGGGCGCGCTGGTGGAAAAGTTCCTCGGCGTGAAGCTTGACAAAGGACCGCAAAAAGCCGACTGGGCGCGCCGCCCGTTGACCAAACGGATGGAGGATTACGCCCGCAACGACACGCGCCACCTCAAACCGCTGGAGGAAAAACTCCGGGCCGAACTCGTCGCCCGCGGCCGGCTCTCGTGGCATCAGGAAAGCTGCGCGCGGCTCATCCAGGAAAGTTCCGTCACGCCGGTCATTGATCCCGACGAGGTCTGGCGCATCAAGGGCAGCTCGTTTCTGGAACGCGCCGCCCTGGCCGTTTTGCGCGAACTCTGGCACTGGCGCGAACGCGAGGCCCTGGCCGCCAGCCGTCCGCCGTTTTTCGTGCTGGCGCACGAGAAAATGATCCAGATCGCCACCGCCGCCTCCGAAGACCAACCGTTCGAGCCGTTGATTCCGCCCCGCATGAACACGCGCCGCCGGGAAAACCTGGTGGAAGCCGTCATTGCCGGGAAATCCGTGGCCCCGGAAAAATATCCCGAAAAAATCCGGCACCGTTCGCAACGCCCCACCGAGGCGGAATTCCGCCGGTTCCGCGAACTGGAAAAAGTCCGCAATCATCACGCGCACAAGCTGGGCATTGACCCCACGCTCATCGCGCCCAAGGCCGTGCTAGGCGACCTCGCCCGCAACTGGGAAAAATACGCGCCGGAACTGATGAACTGGCAGCGGGAATTGTTGAGCTGA
PROTEIN sequence
Length: 352
VIDTDEKLAQFLPLIRSAAWLAIDTEADSLHAYPEKVCLIQISTADGDRLVDPLAKMDINPLLDALAGRELIFHAADYDLRLLRKHHDFTPTEIFDTMLAARLLGERQFGLGALVEKFLGVKLDKGPQKADWARRPLTKRMEDYARNDTRHLKPLEEKLRAELVARGRLSWHQESCARLIQESSVTPVIDPDEVWRIKGSSFLERAALAVLRELWHWREREALAASRPPFFVLAHEKMIQIATAASEDQPFEPLIPPRMNTRRRENLVEAVIAGKSVAPEKYPEKIRHRSQRPTEAEFRRFRELEKVRNHHAHKLGIDPTLIAPKAVLGDLARNWEKYAPELMNWQRELLS*