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berkeley_reactor_200306_planktonic_scaffold_208745_59

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 70150..70443

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase beta domain protein region n=1 Tax=Geobacter sp. (strain M21) RepID=C6DYZ6_GEOSM similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 89.0
  • Bit_score: 117
  • Evalue 4.00e-24
DNA polymerase III subunit beta {ECO:0000313|EMBL:KJU83935.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 91.0
  • Bit_score: 119
  • Evalue 1.50e-24
DNA polymerase beta domain-containing protein region similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 89.0
  • Bit_score: 117
  • Evalue 1.10e-24

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Taxonomy

Candidatus Magnetobacterium bavaricum → Candidatus Magnetobacterium → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 294
ATGCTGCTCAAGATTTTGGCGCAGCATGTTCCCGACGCGGAGGTGTGGGCTTATGGCAGCCGCGTGAACGGTGGCGCGCATGAAGGTTCAGACCTCGACCTCGTGGTGCGCAGCCCGGACCAATTGCATGTGCCGCAAAAAAATCTTCACCTTCTGCGGGATGCCTTGACCGAAAGCAACCTGCCCATGCTCGTGGAAGTGCTGGACTGGGCGCGGATTCCCGAAACGTTCCGCCGCGAAATTGAACGGCAGCATGTGGTCGTGGTGTCAGCCGAACACATCGCTGCCAAATGA
PROTEIN sequence
Length: 98
MLLKILAQHVPDAEVWAYGSRVNGGAHEGSDLDLVVRSPDQLHVPQKNLHLLRDALTESNLPMLVEVLDWARIPETFRREIERQHVVVVSAEHIAAK*