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berkeley_reactor_200306_planktonic_scaffold_228973_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(17060..18376)

Top 3 Functional Annotations

Value Algorithm Source
Mammalian cell entry related domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHU5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 448.0
  • Bit_score: 318
  • Evalue 5.40e-84
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EEF60673.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 448.0
  • Bit_score: 318
  • Evalue 7.60e-84

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1317
ATGCCCCTGCAAGATCTGACCCCGCAACTGCGCACGCGCCTGAACCGCATGGAACGGGCGGTGGGCTGGCTTGTCCTCATCGCCGCCGCGCTGCTGCTGTTCGGTTTTGGCGGCTACATTTATCATGCGGCGCAGCGCAAGGGCTGGTTCAAGATCAAGGCGCCGTTTCACACCTACGTTCAAACCTCCGCCGGATTAAACGTGGGCGATCCGGTTTACATGATGGGATTTCCGGTGGGCGAGATCACCGCCATTCAAGCGATGGCGCCAGGCGACAAACGCAATGTGCGCATTGATTTTGAGATCCGCGCCGACAATCACGCGGATTACTTCCGCTACATCTGGCGCGACGGATCGTATGTGAAAATCAACAACGCCGGCTTTCTGAACCAGCGTCAGCTTGAGGTGACACGGGGCACGAACGGCCCGGCCATTGTGGTCACGCAGCCGGGCGTGTGGAAGACGATTCCCGAGTTGGAACAACTGGTCGTCGCGGAAACCAATCACTGGCAGCTTTACCAGGATGTGCTCGACGCCAAATCGAATTTGGTTTTTGGCGCCTACACCCTGCTCAATGAATCGAACCTGGAGCGGATGGTGGCGCTGGACCTGCCGACGAATTCCGTGTTTCCCACAAATCGCCTCTTCGTTTACGACAATACTGTCAACGAAAACCACATTGTGGCATCGTGGGATAATCGCGTGCGGCGGTATGTGAATTTTTCTCCCAAACGCGACAGTGCCTGGCTGCGCGCCATCGAGACACCGCCCGTTTCCGATCAATTACAGGCGATGGTTTCGCGCGTGCAGGCGGCCGTGCCCGGAATTCTGGCGCTGACCAACAAGCTGAACACCGTGCTGGACAACACCGCCGACGCCGCCGCGAATCTCAACGCGGCCATCCTCGCCGCGCAGCCGGCGATGACCAATCTCTCGGTTGTGAGCGCCGCATTGCGGGAGCCGGGTGGGCTGGCAACCTGGGCGCTGGGCACCAACTCCCAGTTTCAACTGGCAACGGCGCTGACCAATGCGAACGGCATGATGATCAATGCCAACACGAATCTGGCGCGGCTTTCCGCAACCATCACCGTGACCCTGGAAAATCTCGCCAACATTACGAGCAACTTGAACGTCCAGGTGCAGGCCAACTCAAATCTGCTCGGCGGCATTTCCCAAACGGTGAGTGACACGGATGACTTCGTGCAAGGATTGAAGCGGCACTGGCTGTTCCGCTCGGCGTTTAAAACGGCAAAACCGGCGGAAACGAACGCCCCGGTTGAGCGCCTGAGATCGCCGCGCGATGCAGCGAATCAGTGA
PROTEIN sequence
Length: 439
MPLQDLTPQLRTRLNRMERAVGWLVLIAAALLLFGFGGYIYHAAQRKGWFKIKAPFHTYVQTSAGLNVGDPVYMMGFPVGEITAIQAMAPGDKRNVRIDFEIRADNHADYFRYIWRDGSYVKINNAGFLNQRQLEVTRGTNGPAIVVTQPGVWKTIPELEQLVVAETNHWQLYQDVLDAKSNLVFGAYTLLNESNLERMVALDLPTNSVFPTNRLFVYDNTVNENHIVASWDNRVRRYVNFSPKRDSAWLRAIETPPVSDQLQAMVSRVQAAVPGILALTNKLNTVLDNTADAAANLNAAILAAQPAMTNLSVVSAALREPGGLATWALGTNSQFQLATALTNANGMMINANTNLARLSATITVTLENLANITSNLNVQVQANSNLLGGISQTVSDTDDFVQGLKRHWLFRSAFKTAKPAETNAPVERLRSPRDAANQ*