ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_253396_9

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 7283..9028

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH id=5087463 bin=OP11_3 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 28.6
  • Coverage: 336.0
  • Bit_score: 141
  • Evalue 1.60e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 368.0
  • Bit_score: 134
  • Evalue 9.30e-29
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 585.0
  • Bit_score: 575
  • Evalue 4.60e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_11_51_15 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1746
ATGCGGCGCTTCCCCGGCAACAAATTGGAACTCGGCATCGTGGACGGCAAAGGCGTCCCGCTTGAAATGACGCCCCGGATGCGCTCGACGCATCTCTACATCTGCGGTTCCACCGGCACGGGCAAAACCAAGATGCTCGAACACCTTTGCCGGCAGGACATCAAGCAATGGCACAAAAGCAAATGCGGCGCCCTCATCATTGATCCGCACGGCAGCCTCTACGATTCGCTCATCAACTGGATTGCCTGGAACGAACCATATTTGAAAGACGTGCCCATCGTGCCGATTGATCTCCGGCAAAAAGACTGGACGATTGGCTACAACGCCCTGCGACCGCGCACCGTAGCCGAGCCTTCCGTGGTGATTGATAATTTGGTGCAAGCGATTGCGTATGTGTGGGGCGCAGACGGATTGCAAAACACTCCCCTGTTTGCCCGTATTGCCAAGGAAGTGCTGTGGCCGCTGTATGAAAAGAAGCTGACACTACTTGAAGCGGAACATTTGGTTGACCGCATCAACAAACGCGTCCGCAGCGAACTCACCGAAGGATTGTCAAAACATTCGATTGCGCAAAGCTGGCTGTATTCCAACACATTGTCGCCCCGCGATTTTGACGCGCAGGTTTCCAGCACCGTCAACCGCTTCAACAGCTTCATGCACGCCGAAAAACTGCGGCTCATGTTTGGCCAGAATGGGGCATCGCTTGATTTGGGCAAGGCGCTTGAGGAAGGCCAAATCATCATCGCCAATCTTTCGACTGAGGGCGCACGCGTGTCCGAAGAAGATGCTTCGCTTTTTGCCACCGTGCTTTTGAGTGACCTTTGGACCGCCGCCAAAGAACGCGGCAAAGGCACCGACGAAACCGACGTCAAGCCCTTCTATGTCTATGTGGATGAATTCCAAAATTTCGTCACGCCAACGATTGCCAAGAATCTCGATCAAGCGCGTGGTTTTGGACTTCACCTGACGCTTGCCAACCAGTTCCCGCGCCAAATTCTTCATGCCGGCGCGAATGGCCAGCAAGTTTATGACTCAGTGATGGCGAATGCCCGAAGCAAAATCGTGTTCAGTCTGGAAGGCGAAGAAAATCTGCGTCCGCTGGCAATGTCCCTGTTTATGGGGGTGATGAACCCCGATGAAATCAAACTGCAATTGTTCGCCCGGAAAATCATGGATTACGTCGAGGAAACCCGAGAAATCGTTAGTGAAAGTGAAAACTGGAGCGATGGCACTGGTGATTTTACCGGCCAGACGGATACTGAAAGTGCCGCCGGAGCAATCTATGACGGCACGCAGGAAGAAGCTCATTTATGGAATATTTCCACCGCAGCCTCTGCGGGCACGTCACATACCAGCATGCGCGGTGGCGGACGTGGTAAATCTACCGTGCCTTTCCTGAAGGCAATTTTTGGTTCCGAATTATCGAGCGTGCAATTTCGCAGTTTGGAAGAACAAATTTTCCGCGCAATGCTGGCTCTGTCCGATCAGCAACAGCGACATGGCATTGCCAAGCTGGTGGGAATGCGTTCCCCGTTCAGCATTGAAACGCCCATCGTGACCAAGAAACCTACGACAAAGGAAATGACGCATTCCTTTTTAACTAGTGTGTATGAAAAACTCCCGTTTGCTTTGCGTAGCGAGATTGCCCGCAAGCAGATTGAGGAACGACAGCAGAAAATAATTTCCGGAGCGATTCTCAAAGCCAGCAGCACCGAGCCAGTTGCCGTTCGGCGGAAAGCCGCCTGA
PROTEIN sequence
Length: 582
MRRFPGNKLELGIVDGKGVPLEMTPRMRSTHLYICGSTGTGKTKMLEHLCRQDIKQWHKSKCGALIIDPHGSLYDSLINWIAWNEPYLKDVPIVPIDLRQKDWTIGYNALRPRTVAEPSVVIDNLVQAIAYVWGADGLQNTPLFARIAKEVLWPLYEKKLTLLEAEHLVDRINKRVRSELTEGLSKHSIAQSWLYSNTLSPRDFDAQVSSTVNRFNSFMHAEKLRLMFGQNGASLDLGKALEEGQIIIANLSTEGARVSEEDASLFATVLLSDLWTAAKERGKGTDETDVKPFYVYVDEFQNFVTPTIAKNLDQARGFGLHLTLANQFPRQILHAGANGQQVYDSVMANARSKIVFSLEGEENLRPLAMSLFMGVMNPDEIKLQLFARKIMDYVEETREIVSESENWSDGTGDFTGQTDTESAAGAIYDGTQEEAHLWNISTAASAGTSHTSMRGGGRGKSTVPFLKAIFGSELSSVQFRSLEEQIFRAMLALSDQQQRHGIAKLVGMRSPFSIETPIVTKKPTTKEMTHSFLTSVYEKLPFALRSEIARKQIEERQQKIISGAILKASSTEPVAVRRKAA*