ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

berkeley_reactor_200306_planktonic_scaffold_253396_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 14186..17089

Top 3 Functional Annotations

Value Algorithm Source
PHP domain-containing protein n=1 Tax=Brevibacillus sp. CF112 RepID=J2R622_9BACL similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 977.0
  • Bit_score: 599
  • Evalue 6.00e-168
PHP domain-containing protein {ECO:0000313|EMBL:EJL48017.1}; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 977.0
  • Bit_score: 599
  • Evalue 8.40e-168
type III restriction protein res subunit similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 976.0
  • Bit_score: 561
  • Evalue 3.00e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevibacillus sp. CF112 → Brevibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2904
ATGAAAATCCCACAGGACAAAGGCGCTAGTTTCAGAAAGTGTGACTTCCAAGTCCATTCCTTGCGCGATGCTGCATGGTCTGGCCCTTTCGCTGATCCGGTGAATGACAGATCTGCGTATGCCGATGCACTTGTTGCGGATTGTCGAAAAAAGGGTGTTCAGGCTATCGCCATTACGGATCACCACGACCTCTGTATGTGGAAAATTGTTCGAGCGGCGGCAGAAACAGAGAAACAGACCGACGGCAATATACTCCCCGTTAATGACCGGCTCGTCGTTTTCCCAGGTATTGAGCTTACACTTGCTACCCCATCATGTCAGGCCATCATCATCTTCGACCCAAATTTGCCAGATGCCATTCTTGGAAATGTGTGGGGAGCATTGAGACTAACCCCCGCACCAGACACGAGTGCGAAAACCACATCAACAAATGCGCTCCACACCGATTTGACGTTTGAAGAAATTACGCGTGCACTTAATGGAATCAGGACAAACCCAGATGAAACCAATCCAAACAAATATAGTTTTTTGGAACGAAGATTTATTTTGCTGCCAAACGTAAAGAAAAACGGACATAAAAATATTTTACGGGATGGTTTTCAGTCCCATTTTATCTCAATGCCCTGTGTTGGTGGATATATTGAAGGTGTTTTTTATGCCGACCTTGAATCTCGCAACAAAGATATTCTTGAAGGAAAAAATCTTCAGTGGGGCAATCGAACATTAGGCGTTTTTCAAACCTCTGATTGTAGAGAAGCAACAAAAACTACAGTCGGTGGAAAAACGCTGATAGATTTTACAAACCTTGGGGCATGGCCCACATGGGTCAAATGGGCAGAGCCGTCAGCCGAAGCTTTGCGGCAAGCCTGTCTTGCAAGACGCTCCCGTATCAGTCATACCGAACCAGCGTTCCCTCTGTTTCAAATTGCCGGCGTGACTGTCAGCGATAGTAAATTTCTCGGCGCAGTTGAGCTTGGACTTAATCCTCAATTCAATGCTTTTATAGGCGGTCGAGGAACCGGCAAGTCGTCATTGTTAGAGTATATCCGCTGGGCTTTATGTGACGATCCCCTTTCCGTATTGGAGGCATCCGAACTACCGGATTTCCAAAAAAGAAGAAAAAAGTTGGTAAACGACACGCTGAAACCCAAAAACGCGAAAGTGACGGTATTTTACAAAAAGAACGAAGTTGTTTATCGGATTGAACGGACAATTACGGACAAGGCCGACACCATTGTTGTTTTCGAGCCTGACGGCAAGTCACAGACGATGACAGCCGAACAGGTGCGTAGAGAATTCCCCATCGTTTCATACGCTCAAAAGCAGTTGAGTTGTGTCGGAACATTGCCAGAGGAAATCAATCGGCTTATTACCGACCCGGTAAAGGAACGCCTTGCACAAATACAGGATAAGATTGAAAAAACTATACTACCACAAGTTCGACAGCAGCGGGCGCGCGAGTTGCAACTAAAAACCTTAAACGGTCAACTCACCGAGCTTGCTATAACAGTGAAAAGCAAGAAGGAACAAATTCAAGCACTTCAAACACAGCTTCATTCGCTGACCCCCGAACAACAACTCATTGTGCAGGCACATGATTTCTTGAACCAACAAGATCAGGCGCTTAACCGTGCAAAAGAGTTGCCCGAAAAAATAGCTGTATTGTTGGAGCAAACCAGTCGTCAATTAAATGCTCTTGGAAATGCAGTCGTGGCTGGTGATCTTCCAGACGCAACCAAGGTTCAGAAAGTCGCCGACGACGCGAATAGATTTCTTAAAAAGTCTGTCGAATTGCTCGACAAGTTGGCCTTGGAGGGAAAATCCAGTTCTTGGATTAGCAAGGAAAGCCAAGAGATTATTGAGGCTTTGCGAAAACTCTTTTCTGACCACCAGACGGAATACAACAAGTGCGTCCAGGAAAGCGCGAAAAACGCGAAGCAACTTGAGGAAATTAAAAGCCTAAACATTCAAATATCCAAACTGGAAATTAAGCACGCCGATATGGAATCGGAACGTAACAGACTCAAAGTTATATTTGATGAGATCGGGAAAATTCATTGGGATAACTTTTTAGCATCTTTGAAGGAGCGTTCAGAATTGTTAAAGAAGCAATGCGAAACCATCGCAAACCAAGCTCAACACGAGTTCAAACCGGAGCTGGCATTTTGCGGGAACAAAAATCCTCTCTACGAAGCCATCGAACGACTTGTCCAAGGAAGAAATGTTAAAGACAGCGAACAAAAGGTAGAAACTCTAGCTACTCTTATTTGCACGGCAGAGCATCCGATTCTAAAGTGGTCTGAATTCATGACAGAACTCGACGCGCTTTTTGAAAGCAAAGATTCCGACGCATTGCCGGAATCACCCATTTTGAAAGAAGCTGGTTTTACGGCTGCAAACATGGATTCTATCAGGAGTGGTGTTAAGCAGGAGGTTTTGGAGCAAATTCGCTTTCAGAATATTGACGATCAAATCAAATTCTCATTTCGGCTTGGAAATAAAGCTGGTGGGGCAAGCAATTACATTCCTTTTGATCTTGCTTCACCTGGTCAACAGGCAACCTGCCTATTGAGGACATTGCTTGCGCAAGAGGGGGCGCCATTGCTTATTGATCAACCGGAAGAGGATCTCGACAACGAACAAGTTCATGTGTTGTCAGAGCGAATTGCTGAAACTAAACACAATCGGCAACTGCTATTCGTAAGTCACAATGCAAACATAGTCGTGAATGGTGATGCAGAACTTGTTGTGTGTTTTGGATACCAAGAAGCCAGCGACAATACTCACGGTAAAATTGATCCGGTCGGTTCTATTGATTGTTCATCCGTGCGTGAATCCATCACAAAAGTAATGGAGGGTGGCAGGCAAGCATTCGAGTTAAGGCAAAAGAAATACGGCTTTTGA
PROTEIN sequence
Length: 968
MKIPQDKGASFRKCDFQVHSLRDAAWSGPFADPVNDRSAYADALVADCRKKGVQAIAITDHHDLCMWKIVRAAAETEKQTDGNILPVNDRLVVFPGIELTLATPSCQAIIIFDPNLPDAILGNVWGALRLTPAPDTSAKTTSTNALHTDLTFEEITRALNGIRTNPDETNPNKYSFLERRFILLPNVKKNGHKNILRDGFQSHFISMPCVGGYIEGVFYADLESRNKDILEGKNLQWGNRTLGVFQTSDCREATKTTVGGKTLIDFTNLGAWPTWVKWAEPSAEALRQACLARRSRISHTEPAFPLFQIAGVTVSDSKFLGAVELGLNPQFNAFIGGRGTGKSSLLEYIRWALCDDPLSVLEASELPDFQKRRKKLVNDTLKPKNAKVTVFYKKNEVVYRIERTITDKADTIVVFEPDGKSQTMTAEQVRREFPIVSYAQKQLSCVGTLPEEINRLITDPVKERLAQIQDKIEKTILPQVRQQRARELQLKTLNGQLTELAITVKSKKEQIQALQTQLHSLTPEQQLIVQAHDFLNQQDQALNRAKELPEKIAVLLEQTSRQLNALGNAVVAGDLPDATKVQKVADDANRFLKKSVELLDKLALEGKSSSWISKESQEIIEALRKLFSDHQTEYNKCVQESAKNAKQLEEIKSLNIQISKLEIKHADMESERNRLKVIFDEIGKIHWDNFLASLKERSELLKKQCETIANQAQHEFKPELAFCGNKNPLYEAIERLVQGRNVKDSEQKVETLATLICTAEHPILKWSEFMTELDALFESKDSDALPESPILKEAGFTAANMDSIRSGVKQEVLEQIRFQNIDDQIKFSFRLGNKAGGASNYIPFDLASPGQQATCLLRTLLAQEGAPLLIDQPEEDLDNEQVHVLSERIAETKHNRQLLFVSHNANIVVNGDAELVVCFGYQEASDNTHGKIDPVGSIDCSSVRESITKVMEGGRQAFELRQKKYGF*