ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_253396_67

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(80229..81629)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9N0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 464.0
  • Bit_score: 399
  • Evalue 2.60e-108
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEF63274.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 464.0
  • Bit_score: 399
  • Evalue 3.60e-108
major facilitator superfamily MFS_1 similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 464.0
  • Bit_score: 333
  • Evalue 6.40e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1401
ATGCACGAAACTGAAAGCCAGGAAGACTTGACACCCGCGCCGCCGGCCGCCGCCGCCGACCATCCCTACGGTGTGTTTCGCAATGCGGATTACGTGCGCTATCTCGTCGCCCGCTTCATTGCGGCATTCGGGATGCAAATGCTCGTCACGGCGCTGGACTGGGAACTTTACAAACGCGCCCAGTCCGGCCTGGCGCTCGGCTTCGTCGGCCTGTCCCTGATGGTGCCGATGGTGATCTGCACCCTGCCGGCCGGCCAGCTGGCCGACCGGCGCAACCGCAAAAGCATCATTCTCGGCGCCACGCTCATGCTCGGGCTGGCCAGCCTCGGACTGACCCTGACGTCGGCCTTCATCGCGCTGGACCAAAAGGTCGGCACCTTTCAGCTCTGCGCCTATTCCTTGATTGTGTTCATCGGCGTGGCGCGAACCTTTCTGTGGCCGGCCAGCGCGGCCTTCGTCACCGCGCTGGTTTCCCGCGAAGAACTGCCGCGCGCCATCACGTTCAACAGCGGCGCGTTCCAACTGGCCAGCGTGATCGGCCCGACGATGGCGGGCGTCGTCATCTGGCTCACACACGGCGCGTGGCTGGTCTATGCCATCAATGTCGTTGCCGGTCTTATTTGTTTTGGCCTCGTCGCCAGCATCCGGCATGAACACAAGGTGCCGCCGCGCGAACCAATTTCGCTCAAGACGCTCGTCACGGGATTCCGCTTCGTTTATCAAAACAAGATCATCCTCGGCACCATCACGCTTGACATGTTTGCCGTGCTGCTCGGCGGCGCGGTGACCCTGCTGCCGATTTACGCGGCGCAAATCATCCCGCTGAACGGCGGCGCGGGCGGGCTGGGTTTGGGCATTCTGCGCGCCGCGATTCCGATTGGCGCGGTGATTTGCATGTTCATCATCGCGCATCGTCCGCCCCTGCAAAAGGCGGGCCGCGCCATGTTGATCTGCGTGGCCATTTTCGGCCTGGCGACCATTCTCTTCGGCGTGGCCAACCAGGAATGTCTGGGCCGGTTCATTCCGGCGCCGGACGTGGTTTGGTTCTGGGCCGCGTTCGGACTGATGGCCCTGTGCGGCGCGGTGGACAACGTGAGCGTCATCGTCCGCCAAACGCTGGTGCAAATTCTGACGCCCGATGAAAAGCGCGGCCGGGTTTCCGCGGTGAACAGCCTGTTCATCGGCACCTCCAACGAACTGGGCGGCACAGAATCCGGTTTCACCGCGCAATGGTTTGGGCCGGTCCTGTATGGCGCCGCCGAAGGCAGCCCCGCTTACGCGCACGCGATGGCGATGGGCGCGATCTGGTCCACCGTGGTGGGCGGCTTCGGCACGGTGATCGTGGTGCTGGCCGTGGCGTGGATCTGGCCGGAGATCCGGCGGTATGGGAAGCTGGCGTGA
PROTEIN sequence
Length: 467
MHETESQEDLTPAPPAAAADHPYGVFRNADYVRYLVARFIAAFGMQMLVTALDWELYKRAQSGLALGFVGLSLMVPMVICTLPAGQLADRRNRKSIILGATLMLGLASLGLTLTSAFIALDQKVGTFQLCAYSLIVFIGVARTFLWPASAAFVTALVSREELPRAITFNSGAFQLASVIGPTMAGVVIWLTHGAWLVYAINVVAGLICFGLVASIRHEHKVPPREPISLKTLVTGFRFVYQNKIILGTITLDMFAVLLGGAVTLLPIYAAQIIPLNGGAGGLGLGILRAAIPIGAVICMFIIAHRPPLQKAGRAMLICVAIFGLATILFGVANQECLGRFIPAPDVVWFWAAFGLMALCGAVDNVSVIVRQTLVQILTPDEKRGRVSAVNSLFIGTSNELGGTESGFTAQWFGPVLYGAAEGSPAYAHAMAMGAIWSTVVGGFGTVIVVLAVAWIWPEIRRYGKLA*