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berkeley_reactor_200306_planktonic_scaffold_253396_121

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 139618..140607

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGA0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 327.0
  • Bit_score: 452
  • Evalue 3.10e-124
Radical SAM domain protein {ECO:0000313|EMBL:EEF61262.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 327.0
  • Bit_score: 452
  • Evalue 4.30e-124
radical SAM protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 301.0
  • Bit_score: 205
  • Evalue 1.90e-50

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 990
GTGCAGGTGGACTTGCACAGCCGGGCCGTTGAAGCGACTCGCGCTCAATTTGGCCACGAGGTTTTCGTGCGCGCCGTGGTCGAGGTTTCAAATTTCTGCCGGGAAAATTGCGCCTATTGCGGCATGCGGCGCGACCATCGCGAGCTGAAGCGCTTTCGCGCGCGGCAGGAACAACTCGCCGGGCTGCTGCTGCACCACCGGCCAGCCAGCGTCACCGACATCAACATCCAGGCCGGTGAAGATCCGGTCGCCGTCCGCGAAATCGTTCTGCCGCTCATCCGAACGCTGCGCCGCGAAACTCCGCTCGGCATCAGCGTCTGTCTCGGCACGCTCACCCCGGAACTCTACGCGGAATTGCAAGCTGCGGGCGCGAGCATCTACATCATCAAGTTTGAAATCGGCAGCGCCGCGCAATACGAACACTTCCAGGCGCCCGGCACCTTTGCCGAGCGCTTGCGCCACATCCGGCTGCTCGCGGAAAGCGGCTGGAAGGTGAGTTCCGGTTTCATCGCCGGATTGCCCGGGCAGACCACCGCGCAACTGCTTGAAAATTTTGCCGTGGCCCGTTCGCTGCCATTGAGCGGATGCAGCGTCAGTCCGTTTATTCCCGGCAGCGAAACGCCGCTGGCGGGCGCACCGCCGGCGAAATCGCATTGGACGTTGAACGCCATCGCCGCGCTGCGGTTGATGCGGCCCGACTGGGTCATTCCCGCCGTCAGCGCGTTGAACTTGATGGAGCCGGACGGCTATCGCCACGGGCTTCGTGCCGGCGCCAACCTCGTGACCATCAACCTCACGCCCGACGAAATGCGCGGCGACTATGTCATTTACAAGCGCGACCGCTTCATCATGACCGAGGAGCGCGTGCTCAACGCCATCGCGGCCGAAGGTTTGACACCTGCGGCCATCGGTCTGGCGGAGTATTACCGAAACCGCCCAACCGCCGATTCCTTGCGAGAAACCTTTCCGGCCGCCGCCAGCGCCGTTTGA
PROTEIN sequence
Length: 330
VQVDLHSRAVEATRAQFGHEVFVRAVVEVSNFCRENCAYCGMRRDHRELKRFRARQEQLAGLLLHHRPASVTDINIQAGEDPVAVREIVLPLIRTLRRETPLGISVCLGTLTPELYAELQAAGASIYIIKFEIGSAAQYEHFQAPGTFAERLRHIRLLAESGWKVSSGFIAGLPGQTTAQLLENFAVARSLPLSGCSVSPFIPGSETPLAGAPPAKSHWTLNAIAALRLMRPDWVIPAVSALNLMEPDGYRHGLRAGANLVTINLTPDEMRGDYVIYKRDRFIMTEERVLNAIAAEGLTPAAIGLAEYYRNRPTADSLRETFPAAASAV*