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berkeley_reactor_200306_planktonic_scaffold_253396_144

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(166076..166540)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSW5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 140.0
  • Bit_score: 131
  • Evalue 5.60e-28
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 135.0
  • Bit_score: 112
  • Evalue 7.60e-23
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 242
  • Evalue 3.20e-61

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Taxonomy

R_RIF_OD1_11_51_15 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCGTGACTTCAACCCGAAGGAATTCAAAGTGACAGCCTTGCGAGATTGCCCGGTGCCGGAGGACATGCTCGTGTGCGAGACGCCGGAACAGGCGGCAGCCTACTGGCGTCTGCATATCGAGCCACATCCGTATTTCAATCCGGAATGCGAATGCTTCGTCATTCTGTTCCTAAATGTGCGCAAGCGCGTGAAGGGACATCAACTGCTGACGATTGGCACGATGGACACCATCTTGGTTCATCCACGTGAGGTGTTTCGCACAGCGATCATCAGCAGTGCGGCGTGCATTCTTTTGATGCACAACCATCCGAGCGGGGAAAGTTCCCCGTCCGAGGCGGATATTAAGGTGACGCGGGATTTGATCCGGGCGGGGCAGCTTCTCAAAATTGAAGTGACTGACCATATCGTCATCGGGCGGCCCGCTTTCACGTCGTTGCGCGCCGCTGGCTACTTCTACAGCTAA
PROTEIN sequence
Length: 155
MRDFNPKEFKVTALRDCPVPEDMLVCETPEQAAAYWRLHIEPHPYFNPECECFVILFLNVRKRVKGHQLLTIGTMDTILVHPREVFRTAIISSAACILLMHNHPSGESSPSEADIKVTRDLIRAGQLLKIEVTDHIVIGRPAFTSLRAAGYFYS*