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berkeley_reactor_200306_planktonic_scaffold_269654_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(24383..24805)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAE6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 138.0
  • Bit_score: 163
  • Evalue 9.30e-38
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF62981.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 138.0
  • Bit_score: 163
  • Evalue 1.30e-37
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 117.0
  • Bit_score: 111
  • Evalue 1.50e-22

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 423
ATGCCGGCCAAACGCAGCAGTTCGAAAAAGTTGACCAGCGCGGAGAAGCGGGATCTCGATACCAAGATTGAATTCATCGAAGGCCTTGTCCGTCGCGACCCGAATTATGTGGACGCGCTCCAATTGTTGGGCGACCACTACACGCAGCGCGGACGTTATGTGGACGGTCTCCAAGTGGACGAACGCCTGGCCCGGCTGGAGCCGGAAAATCCGCTGGTGTTTTACAACCTGGCCTGCAGTTACTCGCTGACGGAGGAAATTGACCGGGCGCTCTTCGCGCTCGACCACGCCATCAAGCTCGGCTACCGCGATTTTTCCTGGCTGGCCCGGGATCCTGACCTGAAGAAACTGCGGTCGAATCCGGCCTTCGCCGAACTGAAGGAAAAAATCCGCCTGCTCAAGCAACAAAGCCGTCAAGAATGA
PROTEIN sequence
Length: 141
MPAKRSSSKKLTSAEKRDLDTKIEFIEGLVRRDPNYVDALQLLGDHYTQRGRYVDGLQVDERLARLEPENPLVFYNLACSYSLTEEIDRALFALDHAIKLGYRDFSWLARDPDLKKLRSNPAFAELKEKIRLLKQQSRQE*