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berkeley_reactor_200306_planktonic_scaffold_269654_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 41465..42436

Top 3 Functional Annotations

Value Algorithm Source
UDP-glucose 4-epimerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPR8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 323.0
  • Bit_score: 550
  • Evalue 8.10e-154
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEF58191.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 323.0
  • Bit_score: 550
  • Evalue 1.10e-153
UDP-glucose 4-epimerase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 332.0
  • Bit_score: 364
  • Evalue 1.80e-98

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 972
ATGAACGTCTTTGTCACCGGCGGCGCCGGTTATATCGGATCCGTTTGCACGGAAGAACTGCTCAACGCCGGACATCAAGTCACGGTTTATGATAATCTCACAGAAGGCCACCGCTCGGCGGTGGATTCGCGGGCCAGTTTCATTCTGGCCAAGCCGGAGGAGGAAGGAAACATTCTCGCTGCGGTCAAGTCGGTGAAACCGGATGCCATTCTGCATTTCGCCGCGTTCGCCCTGGTCGGCGAATCCATGACGAACCCCAAGAAGTATTTCCACAATAACTTCGTCAACGCCCTCAAGCTCGCCGACGCCGCTGTGGAATGCGGTGTGAAAAAATTTGTCTTCAGCTCCACCTGCGCCACCTACGGTCCGCCGGACCGCGTGCCCATGACGGAAGATTTGCCGCAACGCCCGATCAATCCGTATGGCGAATCCAAGCTGATGTTTGAAAAAGCGCTGAAGTGGTATCAGCAGATTTACGGATTGGAATTCATCGCGTTCCGCTACTTCAACGCCGCCGGCGCGAGCGAACAGTTCGGCGAACATCACCGCATTGAGACGCACCTGATTCCGAACGTGCTGTTCGTCGCGCTGGGCCAAAAGCCGCACGTGGAAATTTACGGCACGGATTATCCCACGCCCGACGGCACCTGCATCCGCGATTACATCCACATAAAGGATCTCGCGCAGGCGCACATTCTCGGCCTCGCGCCGGGCAAAAGCGGTTTCTACAATCTCGGCAACGGCGATGGCTATTCCGTGAAGGAAGTCATCCAGATGTGCGAAAAAATCACCGGTAAAAAAATCCCGGCCATTGAAAAACCGCGTCGCGCCGGCGATCCGCCCAGGCTCGTCGCCGCCGCCCACAAGGCGATCACGGAACTGGGCTGGAAGCCGCAGTATCCCAAGCTGGAAGACATCGTCAAAACCGCCTGGGCCTGGCACCAGAAGCATCCGAACGGTTATCCGGATTGA
PROTEIN sequence
Length: 324
MNVFVTGGAGYIGSVCTEELLNAGHQVTVYDNLTEGHRSAVDSRASFILAKPEEEGNILAAVKSVKPDAILHFAAFALVGESMTNPKKYFHNNFVNALKLADAAVECGVKKFVFSSTCATYGPPDRVPMTEDLPQRPINPYGESKLMFEKALKWYQQIYGLEFIAFRYFNAAGASEQFGEHHRIETHLIPNVLFVALGQKPHVEIYGTDYPTPDGTCIRDYIHIKDLAQAHILGLAPGKSGFYNLGNGDGYSVKEVIQMCEKITGKKIPAIEKPRRAGDPPRLVAAAHKAITELGWKPQYPKLEDIVKTAWAWHQKHPNGYPD*