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berkeley_reactor_200306_planktonic_scaffold_255293_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(13649..14620)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLX7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 311.0
  • Bit_score: 402
  • Evalue 3.60e-109
dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 319.0
  • Bit_score: 316
  • Evalue 5.60e-84
Tax=GWF2_Verrucomicrobia_62_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 311.0
  • Bit_score: 405
  • Evalue 5.90e-110

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Taxonomy

GWF2_Verrucomicrobia_62_7_curated → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 972
ATGCAGGATGTCACCACGCTGGAATTCATGCGGGTGATCGCGCGATACGGCGGCCCGGATGTTTACTGGACGGAATATTTTCGGGTTCACGGCAATTCCCGCCCGGAAAAATGGATCCTTGATTCCATCACCCGGAATGCCACCGGCAAACCGGTGGTCGCGCAGCTCATCGGCAACGACGTTTCGGCGCTGGTTCGCACGGCAAAACTGTTGCAAAAATATCCCGTCGCGGCCATTGACCTGAACCTCGGTTGTCCGGCGCCCATCGTTTACCGCAAATGCGCCGGCGGCGGATTGCTTCGCGAACCGCAACGCATTGACGCCATTCTTTCCGCGCTGCGCGAAGCGGTGGCCATTCCGTTCACGGTCAAAACGCGGATCGGCTTTGCATCGCCGGCCGAGTTTGATGCGCTGCTGCCCTTGTTCGCCAAACACCCGATTGATTTGCTTACCATCCATGCGCGGACGGTCGCGCAAATGTATCGGCCCGGCGTGCGTTACGATTTGATCGCGCTGGCGGCGCGGGAGCTGCGGTGTCCGGTGATGTTGAACGGCAATGTGTTTGGCGCGGCGCAGGCCCGGCAGTTGCTGGCTGAAACCGGCGCCTGCGGTTTGATGATCGGTCGCGGCGCGATCCGCAATCCATGGCTGTTCGACCAAATCCGCGCGGCCCTGGCCGGGCATCCCGTCCGACTGCCCGCCGGCCGTGACCTGCTGGCTTATATCCACGAACTGTGGGAGAACGAAATCACCCCGGGAGTCAAAGAATCCGCCCAGGTGCAGCGCATGAAAAAATTCATGAATTTCATCGGCGAAGGCGTGGATGAGCAATTTTTGCACGACATCCGGCGCGTCACGACCACGGCGGATTTCTGGCGTGTGTGCGAGCAATTTCTGGAACACGGCGACCCGCTGTCGCTGGAACCGCCCGGCGGGCGGGCTGCCTCGTTGGATTTGCCGGTTGCGTCTTAA
PROTEIN sequence
Length: 324
MQDVTTLEFMRVIARYGGPDVYWTEYFRVHGNSRPEKWILDSITRNATGKPVVAQLIGNDVSALVRTAKLLQKYPVAAIDLNLGCPAPIVYRKCAGGGLLREPQRIDAILSALREAVAIPFTVKTRIGFASPAEFDALLPLFAKHPIDLLTIHARTVAQMYRPGVRYDLIALAARELRCPVMLNGNVFGAAQARQLLAETGACGLMIGRGAIRNPWLFDQIRAALAGHPVRLPAGRDLLAYIHELWENEITPGVKESAQVQRMKKFMNFIGEGVDEQFLHDIRRVTTTADFWRVCEQFLEHGDPLSLEPPGGRAASLDLPVAS*