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berkeley_reactor_200306_planktonic_scaffold_255293_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(20410..20721)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH82_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 101.0
  • Bit_score: 160
  • Evalue 5.80e-37
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:EEF60717.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 101.0
  • Bit_score: 160
  • Evalue 8.10e-37
clpS; ATP-dependent Clp protease adapter protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 99.0
  • Bit_score: 86
  • Evalue 3.00e-15

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 312
ATGCACGCGACAGGCACAACGGAAGCGCTGCCCGGCATTGAGCCGGAACGCAAAACGGATTCCCGTTCCGAACTGGAACCGGGTTACCTCGTGGTTTGCTGGGATGATCCGGTGAACCTCATGGATTATGTGACGCATGTTTTCCAGGTGGTTTTCGGCTGGAACCGCAAGAAGGCCGAGAAACACATGCTGGAAGTGCATCACTCCGGCAAAAGCATCCTCACCCGCGACAGTTTAGAAAAGGCGGAATTTTATGTGCATCAACTTCAGAAATACACGCTGCACGCCACGTTGGAACGGGATTCAAAATGA
PROTEIN sequence
Length: 104
MHATGTTEALPGIEPERKTDSRSELEPGYLVVCWDDPVNLMDYVTHVFQVVFGWNRKKAEKHMLEVHHSGKSILTRDSLEKAEFYVHQLQKYTLHATLERDSK*