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berkeley_reactor_200306_planktonic_scaffold_255293_22

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(21787..23403)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLQ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 537.0
  • Bit_score: 883
  • Evalue 6.80e-254
ABC transporter related-protein {ECO:0000313|EMBL:EEF59299.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 537.0
  • Bit_score: 883
  • Evalue 9.50e-254
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 537.0
  • Bit_score: 633
  • Evalue 4.50e-179

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1617
ATGCTGACAATTCGAGACTTGAAGATGACGTTTGGCGGGCGCGTGTTGTTTGAAGACGCATCGTTCGGGGTGAATTACGGGGATCGCGTGGCGCTGGTCGGGCCGAACGGCGCGGGCAAAACCACGCTGTTTTCCATCATCCTCAAACAACTGGAGCCGGACGCCGGCACGGTGGAGCGCGATGAATGGACCATGGTCGGGCATCTGCCACAGGAAGCCGAAGCCAACGGCGACGAAACCATCCTCGATGTGGCCACCGGTCGCGTGGACGAATTGCCGCACCTGGAGAAGCGCCTGCTCGAACTGGAGAAGGCAGGCGATGTTTCTTCGCCGGAGTATCTGGAGGCGCACGCGAAACACGACGCGTTGAACGATGCGCAAGTCGAGACGAAGGCGAAGAAGATGCTGCGGGGACTCGGCTTTCGCGATGCGGACTTGGATCGCAAGGCCAAGGAAATGAGCGGCGGCTGGATCATGCGGGCCCGCCTGGCGCGGTTGCTGGTCATGGAGCCGGACCTGCTGCTCCTCGACGAACCGACGAACCATCTCGATTTGCTCGCGCTGCTCTGGCTGCAAAATTATCTGAAGAATTATTCCGGCGCGTTGTTGCTGATTTCGCATGACCGCCAGTTCATGGACGAAGTCGTGACGCAGGTGCAGGAAATTTCCGAGCGAAAGCTGATTCCTTACACCGGCAACTACGAGGATTACCTGCGTCAGCGCGAGGAACGCTACGAGCAGCAACTGGCCGCCTACAAAAATCAGCAGAAGGAAATCGCGGATTTGCAGGCGTTCGCTGATCGTTTTCGCTCCATTCCGTCGAAAGCTTCGCAGGCGCAGAGCAAACTCAAGCAGATCGAGCGCATGGAACTCATTGAGAAACCGCCGGCTCCGCGCAAACCGTTTCGCTTTCAAATTCCCCCGCCACCGCGCGGCGGACAACGCGCCATTTCGCTGAAGAACATTCACATGGCCTATCCGAATACGACCACCAAAGTCTATGCCGGCCTTGATCTGACCATCGAACGCGGTGAGCGCACCGTGCTCGTCGGGCCGAACGGCGCGGGCAAATCCACACTGTTGAAAATTCTCGCCGGCGTGGTGGAGTTTCAGCAGGGCGAACGCGACCTCGGCCACAACGCCAAAATCGGCTATTTCAGTCAGCATCGCGCCGCCACGCTGGATCCGGACAAAAGCGTGCAGGACGAAGTTTTGGCCAGCGCCCCGGCCATGCGCGAGGACGAGGCGCGCGGCGTGCTCGGTTCCTTCATGTTCCGTAAAGATGACATTTACAAGCTGACCCAGGTTTTGAGCGGCGGCGAAAAAAGCCGGCTCAATCTCGTCAAGTTTCTCGTGGATCCGCCGAACCTCCTGCTCATGGACGAGCCGACCACGCACCTTGACATCCAGACGGTCGAATCATTGACGTTGGCGCTGGAACGTTATGAAGGCACGCTGGTATTCATCTCCCACGATGTGCATTTCATTCGTCGCCTGGCGACCAAGGTGCTCCACGTCAACGCCGGGCAGGTGTTTCCCTACGCGGGCGACTACGATTATTTTCTGGAGAAAACCGGCCTGGCGGAGGACGCTCGGGCGGCCCTCACGGCGGGCTGA
PROTEIN sequence
Length: 539
MLTIRDLKMTFGGRVLFEDASFGVNYGDRVALVGPNGAGKTTLFSIILKQLEPDAGTVERDEWTMVGHLPQEAEANGDETILDVATGRVDELPHLEKRLLELEKAGDVSSPEYLEAHAKHDALNDAQVETKAKKMLRGLGFRDADLDRKAKEMSGGWIMRARLARLLVMEPDLLLLDEPTNHLDLLALLWLQNYLKNYSGALLLISHDRQFMDEVVTQVQEISERKLIPYTGNYEDYLRQREERYEQQLAAYKNQQKEIADLQAFADRFRSIPSKASQAQSKLKQIERMELIEKPPAPRKPFRFQIPPPPRGGQRAISLKNIHMAYPNTTTKVYAGLDLTIERGERTVLVGPNGAGKSTLLKILAGVVEFQQGERDLGHNAKIGYFSQHRAATLDPDKSVQDEVLASAPAMREDEARGVLGSFMFRKDDIYKLTQVLSGGEKSRLNLVKFLVDPPNLLLMDEPTTHLDIQTVESLTLALERYEGTLVFISHDVHFIRRLATKVLHVNAGQVFPYAGDYDYFLEKTGLAEDARAALTAG*