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berkeley_reactor_200306_planktonic_scaffold_308111_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20710..21174

Top 3 Functional Annotations

Value Algorithm Source
PTS system fructose-specific transporter subunit IIBC (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 148.0
  • Bit_score: 109
  • Evalue 6.50e-22
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEC3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 154.0
  • Bit_score: 245
  • Evalue 2.00e-62
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EEF61637.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 154.0
  • Bit_score: 245
  • Evalue 2.90e-62

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 465
ATGGATTTAGCCGATATTTTGGGACGTGAACAAATTGTCCCTGACCTGAAAGCTTCCAACCGTTGGGAGGCCATTGATGAACTCATTGGCAATCTCGTGGCCACCGGCAAAATCCAGGCGGCCGACCGGGATGCGGTGACCGCCGCCGTCAAAAAGCGCGAAACCTCCATGTCCACGGGCATTGGTTTCGGCATTGGCATCCCCCACGCTTCCACCGACCTGATCTATGAAGTCGTCGGCGCGCTGGGCCGCTCCGCCAAAGGAGTGAACTTCGACGCGCTCGACAACCAGCCCGTCAAGCTCGTCATGCTGTTCCTCGTGCCGCAAGGCCAGTTTCAAAAGCATCTCCACACGCTGGCCAACATCGCCAAACTCCTCCACAAGGCCGATTTCCGCGAGGCCCTCGAAAAATCCCCCGACGCCAACGCCATGCTCGCGGTGATCAAGGAACACGGGAAGAAATGA
PROTEIN sequence
Length: 155
MDLADILGREQIVPDLKASNRWEAIDELIGNLVATGKIQAADRDAVTAAVKKRETSMSTGIGFGIGIPHASTDLIYEVVGALGRSAKGVNFDALDNQPVKLVMLFLVPQGQFQKHLHTLANIAKLLHKADFREALEKSPDANAMLAVIKEHGKK*