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berkeley_reactor_200306_planktonic_scaffold_295472_15

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 12947..16021

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecA n=1 Tax=Pedosphaera parvula Ellin514 PF8_9BACT">RepID=B9XPF8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 1021.0
  • Bit_score: 1603
  • Evalue 0.0
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 1021.0
  • Bit_score: 1603
  • Evalue 0.0
secA; preprotein translocase subunit SecA (ATPase, RNA helicase) similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 1030.0
  • Bit_score: 1122
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3075
ATGGTAAACCTCTTCAAAGCGATTTTCGGCTCCAAGAACGACCGCGACGTGAAAAAAATCCGTCCGATCGTCGCCCGCGTCAACGAGATTGAAGCCGGCCTGCAAAAACTCTCCGACGACGACTTGCGCGCCAAAACCGCCGCCTGGAAGGAGGAACTCTCCAAAATCGAGGACAACGCCGAACTGGCGCGCCGCCTCGACGAAATCCTGCCCGAAGCCTTCGCCGTGGTGAAAAACACCTGCCGCCGGTTGTGCGGACAGGAGGTGATCGTGCGCGAACATCCCGTGCGCTGGGAAATGGTGCCGTTCGATGTGCAGATCATCGGCGGTTACGCCCTGCACCATGGGCACATCGCCGAAATGGCCACCGGCGAAGGCAAAACGCTCGTCAGCACCATGCCGGTTTATCTGAACGCGCTCTCCGGCCGCGGCGTGCATGTGGTGACCGTGAATGATTACCTCGCCGCGCGCGACGCGGAATGGATGGGCGCGGTCTATAAATTTCTCGGTTTGTCAGTCGGTGTCATTTTGCACGACCAGCCGCCGCGCGTGCGCCGCGAGCAATACGCCTGCGACATCACCTACGGCACGAACGCCGAATTCGGTTTCGATTATTTGCGCGACAACGGCATGGCGCTGCGCAAGGAGGAACAGGTGCAGCGCGGCCATTACTTCGCCATCGTGGACGAAGTGGACTCGATTCTCATTGATGAAGCCCGCACGCCGCTCATCATCAGCGGCCCGGCGGTCCACACGTTTGACGAGCAATACGCCCAGTGGAAACCGACGGTCGAATCGCTCGTGCGCGCCCAGCAGCAGCTCTGCGGACGTTTCCTCAAGGAAGCCGAGGAACTCATCAAAAAGCTGCATCCCGCCGACGGCTCGAACGTCAAAGACGCCACCGAACTGGAACGCGAAATCGGTCTCCTTTTGTTCCGCGTGAAAACCGGCCAGCCGCGTTCCGAGGCGTTGCTGAAAATTTTGGAAAATCCCGAGAACGCCCGCCTGATGAACCAGGCGGAACTGGAACTGCACAAGGACCAGAAAAAAGTGGATTTGTATCGCGAGAAGGAAGAATTGATTTTCGCGATGGACGAGAAAAGCCACGAGGCGGATCTCACCGAAAAGGGCCGCAATTTCATCAGCCCCGGCGATCCGGACGCCTTCGTCCTGCCGGATTTGGCGACGATGCTGCACGACGTGGATGCCGGTCCCGAAACCGACGCCCGCAAGCGCATGGAAATCAAAGCCAAAATGCAGGCGGATTTCGAGACCAAGGCCCAGAAGATGCACGCCATCTCGCAGTTGCTCAAAGCCTACAGCCTTTACCAGCTCGACGTGGAATATGTCGTGCAGGATAACAAGGTCATCATCGTGGACCAGCACACCGGCCGTCTCATGCCCGGCCGCCGCTGGAGCGACGGGTTGCACCAGGCCGTCGAAGCCAAGGAAGGCGTCGCCATCGAACGCGAAACGCAGACGCTCGCGACGATCACCATTCAAAATTATTTCCGCCTTTACACCCGGCTCTCCGGCATGACCGGCACGGCGGAAACCGAGGCGGCGGAATTTCTCGACATTTACAAACTCGGCGTGCTCAGCATCCCGACGAACCGGCCGAACATCCGCAAGGACGCCGACGATTCCGTCTATAAAACGCGCCGCGAAAAATTCACCGCCGTCGTCAAGGAAATCAAAACCCTGCACACGCAGGGCCGGCCGGTGCTGGTCGGCACCGTTTCCGTGGAAACCAGCGAAATGCTTTCGCGCCTGTTGAAGAAGGAAGGTCTCATCCATTCCGTGCTCAACGCCAAGTATCACCAGCAGGAAGCCGAAATCGTTTCGCGCGCCGGCCAGCGCGGCGCCATTACCATCGCCACCAACATGGCGGGCCGCGGCACGGACATCAAACTCGGCGAAGGCGTCGCCGAACTCGGCGGCCTGCACGTGCTCGGCACGGAACGCCACGAATCGCGCCGCATTGACCGCCAGTTGCGCGGCCGTTGTTCGCGCCAGGGCGATCCCGGCTCCTCGCACTTTTTCATTTCGCTGGAGGACGACTTGATGCGCCTGTTCGGCTCCGACCGCATCGTGAAATTGATGGAGCGCATGGGCCTCGAAGAAGGCGAGGAACTCAAGCACGGTTTGCTGAACCGTTCCATCCAGCAGGCGCAGAAGCGCGTCGAGCAGCACAATTTCCAGCAGCGCAAACGCACGCTCGAATACGACGACGTGATGAACAAACAGCGTGAAGTCATCTACGGCTTCCGCAACGAAATCATCAACAGCACCGACGTGCGCGACCGCCTCATGGACATCATCGAGGAAGTCGTGGTGGTTAAGATTGACGAGTTTACCTCGTCCGACGCCGATGTGGCCGAGTGGAATGCGCGCGGCCTGGCCGACTGGGTGAATCTGAACTTCCCGCTCGGCCTGCCCGAGGCCGAAATCGTGAAGGCCGCGCAATCCGGCACGGAAAAACCGGTTTCCGGCTCCCTGTTTGACGGCCTGAGCGCGGCGCAATTCGCCGTCTGCAATTTCATCACCGACGCCATCCGCAAAGCCTACGAATTGAAGGTCAGTTTCGAGGAGCCGGACAAGCTGGCGACCGTCGAGCGTTACACGATCTTGCAGGCGATTGACAAGCTGTGGCAGGAACATCTTTACGAGATGGACAGCCTGCGTTACAGCATCGGCCTGCGCGCCCACGGCCAGCGCGATCCGCTGATCGAATACAAGGCGGAAGCCTTCAAGATTTTCGACGAGTTGATGGTGAGCATCAAATCCGAGATCTGCCACAACGTCTTCCGCAGCGCCTCCAGCCTGATGGCGTTTGAGAACTTCCTCCGCAACGCGCCCCAACAAACCCTGCACCAAACCACCAGCGCCTTCGGCACCACCACCGGTTCCACCAGCGCCGGCCCGGGGAAAGCCAGCGACGTGGTCAGCGAAGCGGCGAACGCGGCGGAAGCCCAAGCCAAGGCCAAACCCGTGCGCACCGGCCCGAAGGTCGGTCGCAACGACCCCTGCCCCTGCGGCAGCGGCAAAAAATACAAGCAGTGCTGCGGCAAGTAA
PROTEIN sequence
Length: 1025
MVNLFKAIFGSKNDRDVKKIRPIVARVNEIEAGLQKLSDDDLRAKTAAWKEELSKIEDNAELARRLDEILPEAFAVVKNTCRRLCGQEVIVREHPVRWEMVPFDVQIIGGYALHHGHIAEMATGEGKTLVSTMPVYLNALSGRGVHVVTVNDYLAARDAEWMGAVYKFLGLSVGVILHDQPPRVRREQYACDITYGTNAEFGFDYLRDNGMALRKEEQVQRGHYFAIVDEVDSILIDEARTPLIISGPAVHTFDEQYAQWKPTVESLVRAQQQLCGRFLKEAEELIKKLHPADGSNVKDATELEREIGLLLFRVKTGQPRSEALLKILENPENARLMNQAELELHKDQKKVDLYREKEELIFAMDEKSHEADLTEKGRNFISPGDPDAFVLPDLATMLHDVDAGPETDARKRMEIKAKMQADFETKAQKMHAISQLLKAYSLYQLDVEYVVQDNKVIIVDQHTGRLMPGRRWSDGLHQAVEAKEGVAIERETQTLATITIQNYFRLYTRLSGMTGTAETEAAEFLDIYKLGVLSIPTNRPNIRKDADDSVYKTRREKFTAVVKEIKTLHTQGRPVLVGTVSVETSEMLSRLLKKEGLIHSVLNAKYHQQEAEIVSRAGQRGAITIATNMAGRGTDIKLGEGVAELGGLHVLGTERHESRRIDRQLRGRCSRQGDPGSSHFFISLEDDLMRLFGSDRIVKLMERMGLEEGEELKHGLLNRSIQQAQKRVEQHNFQQRKRTLEYDDVMNKQREVIYGFRNEIINSTDVRDRLMDIIEEVVVVKIDEFTSSDADVAEWNARGLADWVNLNFPLGLPEAEIVKAAQSGTEKPVSGSLFDGLSAAQFAVCNFITDAIRKAYELKVSFEEPDKLATVERYTILQAIDKLWQEHLYEMDSLRYSIGLRAHGQRDPLIEYKAEAFKIFDELMVSIKSEICHNVFRSASSLMAFENFLRNAPQQTLHQTTSAFGTTTGSTSAGPGKASDVVSEAANAAEAQAKAKPVRTGPKVGRNDPCPCGSGKKYKQCCGK*