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berkeley_reactor_200306_planktonic_scaffold_295472_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(30912..31178)

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 91.0
  • Bit_score: 105
  • Evalue 2.60e-20
Exodeoxyribonuclease 7 small subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ03_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 91.0
  • Bit_score: 105
  • Evalue 1.90e-20
exonuclease VII small subunit similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 72.0
  • Bit_score: 73
  • Evalue 2.20e-11

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 267
ATGTCTAAACCAGCCAGGGCCGGTGATGCGGCCAGGGGCAGCTTGCCGTTTGAAGAAGCCCTCAAAAAACTTGAGGGGATTGTCGAGGTCATGGAGGCGGATGATTTGCCGCTCGAAACCCTGCTCGCCCGTTACGAGGAAGGCGCGCGGCTGGTGAAAATTTGTCAGGAAAAGCTGGCGGAGGCGGAAATTAAAATTCAACAACTGGAAAAAAACGCGGCCGGCGAATTGAAGCTGAAACCGTTGGAACTGTCGGAAGAAGAATAA
PROTEIN sequence
Length: 89
MSKPARAGDAARGSLPFEEALKKLEGIVEVMEADDLPLETLLARYEEGARLVKICQEKLAEAEIKIQQLEKNAAGELKLKPLELSEEE*