ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_295472_29

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(32883..33383)

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 165.0
  • Bit_score: 281
  • Evalue 6.60e-73
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK09_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 165.0
  • Bit_score: 281
  • Evalue 4.70e-73
cyclophilin type peptidyl-prolyl cis-trans isomerase similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 167.0
  • Bit_score: 212
  • Evalue 7.60e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 501
ATGAGCGAAGTTGCCGTTCTCACCACCAGTGCCGGTCAAATGGTCCTCGAATTCTGGCCGGAAGTCGCGCCCGGCCACGTCGAAAATTTCAAGAAACTGGCGAAAGCGGGTTTTTACGACGGCACCTGTTTCCATCGCGTGATCAAGGGTTTCATGATCCAGGGGGGCGACCCGTTGACGAAGGACGCGAGCAAGGAAGATTACTGGGGCACCGGCGGTCCCGGCTACAAGATCAAGGCGGAGTTCAATGACCAGCCGCACGTTCGCGGCGTGCTTTCGATGGCCCGTTCGCAGGATCCGCATTCCGCCGGCAGCCAGTTCTTCATCTGCCACGGCGACCCGCGTTTTCTGGACCGCCAATACACCGCGTTCGGCCGGCTCATCCAGGGCGACGACGTGTTGGAAAAAATCGCCACCACGCCCACGCATCCCGGTGATCGCCCGGTCACGAAGCAAACGCTCACCAGCGTCAAAATCGTCCCGGCGGATGCGGTGAAATGA
PROTEIN sequence
Length: 167
MSEVAVLTTSAGQMVLEFWPEVAPGHVENFKKLAKAGFYDGTCFHRVIKGFMIQGGDPLTKDASKEDYWGTGGPGYKIKAEFNDQPHVRGVLSMARSQDPHSAGSQFFICHGDPRFLDRQYTAFGRLIQGDDVLEKIATTPTHPGDRPVTKQTLTSVKIVPADAVK*