ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_295472_62

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 71622..74141

Top 3 Functional Annotations

Value Algorithm Source
beta-mannosidase (EC:3.2.1.25) similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 834.0
  • Bit_score: 633
  • Evalue 5.40e-179
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain id=3921262 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 831.0
  • Bit_score: 717
  • Evalue 1.30e-203
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 844.0
  • Bit_score: 936
  • Evalue 2.50e-269

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 2520
ATGAAAGCCCTTGGAAAAAAAATTCTTCTGGCCGCAATGTTCACCTTGATGGCGACTCAATGGAATCAGGTTTTCGCGGCGGGAGTGCAAATTCTAAGCTTGGACGGCGCGTGGGAGTTTGCGCCGGCCGGCAGTGATGACTGGCTGCCGGCGCAGGTGCCCGGCTGTGTTCATACGGATTTGCTGGCGGCGCACAAAATTCCCGATCCGTTTTATCGCGAGAATGAAAAGGAGGTTCAGTGGGTCGGCGAAACCAACTGGGATTATCGCCGCACATTTGAAGTGCCCGCCGCCGAACTGGCCCACGACCGCGTCCTGCTGCGCTGCGAAGGACTGGACACATTGGCCACCGTTCGCGTGAATGGACATCGTCTGGGACAGACGGATAACATGTTCCGCACCTGGGAATTTGACGCGAAACCGGTGTTGCGCGCCGGAACGAACACGATTGAAATTTCGTTTGAATCAGTGCTGCCTTACATGCAGGAACACAACGCGGAACGTCCGTTGTATGAATGGGCCGGTGTGCATGAACCGAAAGGCCGCGCCTGGGTGCGCAAGGAGCCATGCAATTTCGGCTGGGACTGGGGTCCGGTGCTGGTCACTTGCGGCATCTGGAAAGACATCGAGCTGGTGACTTTTGACGAGGCGCGGCTGACGGATTTTGCCATGCTGCAGGATTTGTCCGACAAGGCGAAGGCGAAACTCACGGTGAATGTCGCGGCGGAGACCACGCGGCCTGCTGACTTGCAGGCAATCATTCATGTCACCCAAGCCGGCCGGCCCATCGCCGCATCGGCGGCGCCGCTCGTTCACGGCCAAGCCACGGCGGAGTTGACGGTAACCCATCCGCAATTGTGGTGGCCCAATGGCATGGGCAAACATCCGCTTTACACCGTGCGGGTGGATTTGGTGGACGCCCAGCACGCGCTGCTGGACCGCCAGGAACGGCGCATCGGATTGCGCACCATCGCGCTGTTGCCTGCGGACCAAACCCATTCCCTGCGCTTTGCGGTGAATGGCGTTCCCTTTTTTGCCAAAGGCGCCAACTGGATTCCGTGCGATCCGTTTCCTATTCGCGTCACCGCCGCGAAACTGCGACGTTATGTCGCCGATGCGGCGGCAGCCAATATGAACCTGCTGCGTTTTTGGGGCGGCGGTTATTACGAGAAGGACGCGCTCTACGACGCGTGCGATGAAATGGGCATTTTGGTCTGGGCGGACTGCAAATTCGCCTGCTCCGCTTATCCGGCATTCGACGCCCATTTCATGGAGAATGTGCGCCAGGAAATTCGCGACAACGTCCGCCGGTTGCGCCACCATCCGAGCATCGCTGTCTGGTGCGGGAACAACGAAATCTCCCTGATGACCGGTCCCCAATGGACCACCAACAGCATGGCCCGGGCTGATTACGACCAACTCTTCAGTGGATTGATTGGCGGCGAAATCACGAATCTGGCACCGCAAGCCGCTTACGTTCCCGGCAGCCCGGAAGTGGGCGATGTTCACTATTGGCAGGTCTGGCACGGCGGCAAGCCGTTTGAAGCTTACCGCACACTGAACGGGTTCATGAGCGAGTTCGGTTTCCAATCCTTCCCGGAACCCAAAACGGTGGCTACCTACACCGAGGCCACGGACCGCACCTCGCTGTTCACGCCGGTGATGGAATGGCATGAACGCTCCTCCGGCAACGGAGACAAATTGATTTATGACATGACCCGGCGTTATTTCCAGCCGCCGAAGGATTTCGACAACGCGCTGTGGCTGAGCCAGATTTTGCAGGGTTACGGCATCAAGACCGGCGCGGAATTTTGGCGGCAAAACATGCCTATATCCATGGGCTGCATTTTCTGGCAATACGACGACATCTGGCCGGGCGCAAGCTGGTCGTCGGTGGATTATTACGGCCGCTGGAAAGCGCTGCAATATATGGCCCGGCGTTTCTACGCGCCGGTGCTGGTTTCCGGCCAGGTGAACACGACGAATCAATCCGTGGCCGTCTATGTGACCAGCGACTTGCTTCACTCAAGTCACGGAAAACTTTCATGGCAGGTGACCGATCTCAGCGGGACGACGTTGGTGCAGGGAAATGAAAACCTCGATCTGGATGCGCAAGCCAGTCGCCTGGTGAAGCATTTGGATTTGGCCGGGCTTGCCGAAAATCACGGTGCCACCAATCTGCTTGTCTGGCTTGAAATGAGCGTGCCGGGACAAACCGCTTCTAAAAATCTGCTGACGCTTGTTTATCCAAAGGAGTTGAACTTGCCAAACCCTGAGCTGGCAATATCTGTTCGCCAAACTGGCGATGAATTTCAAGTGACCCTGACTGCCAAAGCTCCGGCGCTTTGGGCCTGGCTGACCTTGAAAAATGCGGACGCCAGCTATTCAGATAATTTCAATCACGTGCGTCCCGGTTCACCGCTGGATATTACGGTAAAACCCGAACACCCGATGACACTGGCGGAATTCAAGGACGCCTTGCAGGTGCGGAGTCTCTACGACACTTACCCTCATCCGTGA
PROTEIN sequence
Length: 840
MKALGKKILLAAMFTLMATQWNQVFAAGVQILSLDGAWEFAPAGSDDWLPAQVPGCVHTDLLAAHKIPDPFYRENEKEVQWVGETNWDYRRTFEVPAAELAHDRVLLRCEGLDTLATVRVNGHRLGQTDNMFRTWEFDAKPVLRAGTNTIEISFESVLPYMQEHNAERPLYEWAGVHEPKGRAWVRKEPCNFGWDWGPVLVTCGIWKDIELVTFDEARLTDFAMLQDLSDKAKAKLTVNVAAETTRPADLQAIIHVTQAGRPIAASAAPLVHGQATAELTVTHPQLWWPNGMGKHPLYTVRVDLVDAQHALLDRQERRIGLRTIALLPADQTHSLRFAVNGVPFFAKGANWIPCDPFPIRVTAAKLRRYVADAAAANMNLLRFWGGGYYEKDALYDACDEMGILVWADCKFACSAYPAFDAHFMENVRQEIRDNVRRLRHHPSIAVWCGNNEISLMTGPQWTTNSMARADYDQLFSGLIGGEITNLAPQAAYVPGSPEVGDVHYWQVWHGGKPFEAYRTLNGFMSEFGFQSFPEPKTVATYTEATDRTSLFTPVMEWHERSSGNGDKLIYDMTRRYFQPPKDFDNALWLSQILQGYGIKTGAEFWRQNMPISMGCIFWQYDDIWPGASWSSVDYYGRWKALQYMARRFYAPVLVSGQVNTTNQSVAVYVTSDLLHSSHGKLSWQVTDLSGTTLVQGNENLDLDAQASRLVKHLDLAGLAENHGATNLLVWLEMSVPGQTASKNLLTLVYPKELNLPNPELAISVRQTGDEFQVTLTAKAPALWAWLTLKNADASYSDNFNHVRPGSPLDITVKPEHPMTLAEFKDALQVRSLYDTYPHP*