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berkeley_reactor_200306_planktonic_scaffold_295472_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(84021..85235)

Top 3 Functional Annotations

Value Algorithm Source
Putative PAS/PAC sensor protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC62_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 293.0
  • Bit_score: 246
  • Evalue 2.40e-62
PAS/PAC sensor protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 278.0
  • Bit_score: 201
  • Evalue 3.30e-49
Tax=GWF2_Verrucomicrobia_62_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 408.0
  • Bit_score: 288
  • Evalue 7.80e-75

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Taxonomy

GWF2_Verrucomicrobia_62_7_curated → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1215
ATGAGCCGGACACCGTCATTGCTGGTGGTGGATGATGATCCGGTGTTCTCCCGGTTTGTCGGCCAGCTCGTGATTTCCCTGGGCGCGGATTTTCCGTGCCGCGTGGCATACGCGGCGAGCGTGGACGCCGCCCTGGAACGGCTGGGCGAAGCCTGGTTCGACCTCGCGCTGGTGGATTATCACATGCCCGGCCGCGACGGGCTGGAGTTGCTGGAAGAAATCCGGCGTTTGACGCCGCCCCGGCAGCCCGCCGTGGTGATGCTCACCGGCAGCGGCAGCGCCCCGGTCGCCGTCGAGGCCATGAAACGCGGCGCCCGGGACTATCTTGAAAAGGATGAAGTGGAGACGGCTTCGCTTCTGCGCGCCCTCCAAAACGCGCTGGCGCAAAAACGGCTGGCCGAGCAGGTGGCCGCCTACAACGAGCAAATCCGCGCCGACCTGCAAATGGCGCACCGCCTCCAGGAATCGTTGCTGCCGCAGAGCTACCCCAGTTTTCCCGCCACGGCGGCGCCGGAAGATTCGCTGCTGCAATTCAGCCACCGCTATTTTTGGACGACGGAGCTGGGCGGGGATTTTTTCAGCGTGCAGCGACTGCCCGACGGCCGGGCCGGCGTGCTGATTTGCGACGTGATGGGGCATGGTGTGCGGTCCGCGCTGGTCACCGCCATGCTGCGCACGATGGTGGGGGATTTGGAAAAGCACGCCGCCGATCCGGGCCGGTTTCTCGGCCAGATGAACCGGCGGCTCGCGGCCATTCTCAAGCAAACGGAGGAACCGCTTTACGCCACCGCCTTTTATCTGGTGGTGGATGTCGCGGAAAAACGGATGCGTTACGCCCGTGCCGGCCATCCGGCGCCGCTGCATTTGCGCCCGCAGGCCGGAATCGTGGAACCGCTGCCCATTCCCAGCCACGCCGGCGCCGCGCTGGGGTTGTTTGAAAAGGCCGATTTTGTCACCAGCGAACGTTCGTTGACAGCCGGCGACCGGGTTTTATTGTTCACCGACGGGCTGGTTGAAGTCACGGGCAAATCGGAGGATGACGATTACGGCCAGCAACGGCTGCTGGCCGCCGCGCGGCAACGGCTCCAACGGCCTGTGCCGGAGCTGCTGGATGAGTTGATCGCCGACGCGCGGGCGTTCGCGGGCCGGCATGAATTTGAAGACGACGTATGCCTGCTCGCAATGGAGGTTGCCAGAACGGCGGCCAGACGTTAA
PROTEIN sequence
Length: 405
MSRTPSLLVVDDDPVFSRFVGQLVISLGADFPCRVAYAASVDAALERLGEAWFDLALVDYHMPGRDGLELLEEIRRLTPPRQPAVVMLTGSGSAPVAVEAMKRGARDYLEKDEVETASLLRALQNALAQKRLAEQVAAYNEQIRADLQMAHRLQESLLPQSYPSFPATAAPEDSLLQFSHRYFWTTELGGDFFSVQRLPDGRAGVLICDVMGHGVRSALVTAMLRTMVGDLEKHAADPGRFLGQMNRRLAAILKQTEEPLYATAFYLVVDVAEKRMRYARAGHPAPLHLRPQAGIVEPLPIPSHAGAALGLFEKADFVTSERSLTAGDRVLLFTDGLVEVTGKSEDDDYGQQRLLAAARQRLQRPVPELLDELIADARAFAGRHEFEDDVCLLAMEVARTAARR*